RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 BRI3BPQ8WY22 251 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 FYTTD1Q96QD9 318 aaKnown RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.71□□□□□ -1.343e-6■■□□□ 12.1
CNOT1-216ENST00000569240 A8MU76 341 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 ATP1B2P14415 290 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 GNRHRP30968 328 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 S100A7P31151 101 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 ADH7P40394 386 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 FOXO1Q12778 655 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 PPP1R8Q12972 351 aaKnown RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 PAGE3Q5JUK9 113 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CHADLQ6NUI6 762 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 KIAA0319LQ8IZA0 1049 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 OR8J2Q8NGG1 315 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SPRYD4Q8WW59 207 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 LRIG1Q96JA1 1093 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 TSSK2Q96PF2 358 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 NICN1Q9BSH3 213 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 MARVELD1Q9BSK0 173 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 NSUN3Q9H649 340 aaKnown RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 EQTNQ9NQ60 294 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 MMP26Q9NRE1 261 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 INIPQ9NRY2 104 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 KLF15Q9UIH9 416 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 UTS2RQ9UKP6 389 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 PIRTP0C851 137 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CPEP16870 476 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 RAB6AP20340 208 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CDK5Q00535 292 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 GPR17Q13304 367 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF239Q16600 458 aaKnown RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SMUG1Q53HV7 270 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 TXNRD3NBQ6F5E7 133 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 INTS5Q6P9B9 1019 aaKnown RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 P4HA3Q7Z4N8 544 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CERKQ8TCT0 537 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 C12orf42Q96LP6 360 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 DCAF16Q9NXF7 216 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CPNE7Q9UBL6 633 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 KCNG2Q9UJ96 466 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SLC35A3Q9Y2D2 325 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 YTHDF2Q9Y5A9 579 aaKnown RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 BACE2Q9Y5Z0 518 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 DIP2CQ9Y2E4 1556 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 LY86O95711 162 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 GJB1P08034 283 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CHRM2P08172 466 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 KCNE1P15382 129 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 FGF9P31371 208 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CXADRP78310 365 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 ITPRIPL2Q3MIP1 535 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 OR52P1PQ8NH57 321 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 PPTC7Q8NI37 304 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 OR1E3Q8WZA6 343 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 HLA-CQ95604 372 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 PDXPQ96GD0 296 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 ADAM19Q9H013 955 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 SHARPINQ9H0F6 387 aa6.71□□□□□ -1.34
CNOT1-216ENST00000569240 CASTOR2A6NHX0 329 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 A6NIZ1 184 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 NPIPA5E9PKD4 350 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 C17orf112F2Z3M2 114 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 GSRP00390 522 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 CAPNS1P04632 268 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 ARAFP10398 606 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 CSF2RAP15509 400 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 APEX1P27695 318 aaKnown RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 MCCD1P59942 119 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 RAP1BP61224 184 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 RAB33AQ14088 237 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 ENDOGQ14249 297 aaKnown RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 DECR1Q16698 335 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 AMZ1Q400G9 498 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 FAM171A1Q5VUB5 890 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 SIAH3Q8IW03 269 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 BPIFB2Q8N4F0 458 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 FRZBQ92765 325 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 ECHDC3Q96DC8 303 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF583Q96ND8 569 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 FN3KRPQ9HA64 309 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 PELI2Q9HAT8 420 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 SRA1Q9HD15 236 aaKnown RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 MRPS30Q9NP92 439 aaKnown RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 MRPL17Q9NRX2 175 aaKnown RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 NPIPA1Q9UND3 350 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 TBC1D3KA0A087X1G2 549 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 TBC1D3BA6NDS4 549 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 TBC1D3FA6NER0 549 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 TMEM212A6NML5 194 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 TFPIP10646 304 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 AKR1C4P17516 323 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 C21orf33P30042 268 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 LIPAP38571 399 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF84P51523 738 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 MRPS6P82932 125 aaKnown RBP6.7□□□□□ -1.34
CNOT1-216ENST00000569240 SLC35D3Q5M8T2 416 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 TBC1D3GQ6DHY5 549 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 RANBP10Q6VN20 620 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 KANSL1Q7Z3B3 1105 aa6.7□□□□□ -1.34
CNOT1-216ENST00000569240 PARGQ86W56 976 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms