RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 TP53BP2Q13625 1128 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 EXOC3L2Q2M3D2 409 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 HBMQ6B0K9 141 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 MTERF4Q7Z6M4 381 aaKnown RBP13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 ZNF527Q8NB42 609 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 OR2V1Q8NHB1 315 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 PHOSPHO1Q8TCT1 267 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 SFXN5Q8TD22 340 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 ADAMTS15Q8TE58 950 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 AENQ8WTP8 325 aaKnown RBP13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 NUDT8Q8WV74 236 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 COQ8BQ96D53 544 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 ZC3HAV1LQ96H79 300 aaKnown RBP13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 KLHL4Q9C0H6 718 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 GSX1Q9H4S2 264 aaPredicted RBP13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 TMEM185BQ9H7F4 350 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 GLRX2Q9NS18 164 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 GPATCH2Q9NW75 528 aa13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 FAF1Q9UNN5 650 aaPredicted RBP13.48□□□□□ -0.25
SCAMP2-209ENST00000567638 ARID1AO14497 2285 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 FREM1Q5H8C1 2179 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 NPIPA5A0A0B4J1W7 369 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 NPIPA7E9PJI5 369 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 TYROBPO43914 113 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 SOX30O94993 753 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 NPIPA8P0DM63 369 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 PRPS1L1P21108 318 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 LOXP28300 417 aaPredicted RBP13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 ELK4P28324 431 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 EIF1P41567 113 aaKnown RBP13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 ETV4P43268 484 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 FOXF1Q12946 379 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 LSM12Q3MHD2 195 aaKnown RBP13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 SPDYE7PQ495Y7 208 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 KLHL26Q53HC5 615 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 DCST2Q5T1A1 773 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 PDSS1Q5T2R2 415 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 SHEQ5VZ18 495 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 ANKRD34AQ69YU3 496 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 EMBQ6PCB8 327 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 RIMKLAQ8IXN7 391 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 KRTCAP2Q8N6L1 136 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 MOAP1Q96BY2 351 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 KLHL15Q96M94 604 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 HS3ST6Q96QI5 342 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 PRPF18Q99633 342 aaKnown RBP13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 PIP5K1AQ99755 562 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 BHLHE41Q9C0J9 482 aaPredicted RBP13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 HOXD1Q9GZZ0 328 aa13.47□□□□□ -0.25
SCAMP2-209ENST00000567638 H3BNH8 94 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 OIP5O43482 229 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 PPP3CBP16298 524 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 HOXB4P17483 251 aaPredicted RBP13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 FPR1P21462 350 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 SHC1P29353 583 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 P2RX1P51575 399 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 SUMO3P55854 103 aaPredicted RBP13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 C21orf58P58505 322 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 MAD2L1Q13257 205 aaPredicted RBP13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 ACKR1Q16570 336 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 CBLN3Q6UW01 205 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 STAC2Q6ZMT1 411 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 LILRA2Q8N149 483 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 LRRC75A-AS1Q8N1F1 130 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 OR5AK3PQ8NH89 298 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 OSTF1Q92882 214 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 PIGTQ969N2 578 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 C18orf12Q96KH6 178 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 DUSP26Q9BV47 211 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 UBTD1Q9HAC8 227 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 ICAM5Q9UMF0 924 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 ACTL7BQ9Y614 415 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 KCNE3Q9Y6H6 103 aa13.46□□□□□ -0.25
SCAMP2-209ENST00000567638 NPIPB9F8W1W9 429 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 CFLARO15519 480 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 SMPD2O60906 423 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 NUDT14O95848 222 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 THBDP07204 575 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 TUBBP07437 444 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 G6PDP11413 515 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 NID1P14543 1247 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 ADH6P28332 368 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 AGTR1P30556 359 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 SFTPDP35247 375 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 SOAT1P35610 550 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 RNF144AP50876 292 aaPredicted RBP13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 ATP12AP54707 1039 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 HBA1P69905 142 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 ZNF239Q16600 458 aaKnown RBP13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 GTF2IRD2BQ6EKJ0 949 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 C20orf204Q6ZNR8 217 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 BEND4Q6ZU67 534 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 BIVMQ86UB2 503 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 GTF2IRD2Q86UP8 949 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 FBXO27Q8NI29 283 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 RNF128Q8TEB7 428 aa13.45□□□□□ -0.26
SCAMP2-209ENST00000567638 ZIM3Q96PE6 472 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms