RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 Q8N9L7 120 aa2.69□□□□□ -1.98
PALB2-203ENST00000565038 C7orf33Q8WU49 177 aa2.69□□□□□ -1.98
PALB2-203ENST00000565038 FEM1AQ9BSK4 669 aa2.69□□□□□ -1.98
PALB2-203ENST00000565038 RNF126Q9BV68 326 aa2.69□□□□□ -1.98
PALB2-203ENST00000565038 MYOZ2Q9NPC6 264 aa2.69□□□□□ -1.98
PALB2-203ENST00000565038 ZNF331Q9NQX6 463 aaPredicted RBP2.69□□□□□ -1.98
PALB2-203ENST00000565038 NAP1L2Q9ULW6 460 aaPredicted RBP2.69□□□□□ -1.98
PALB2-203ENST00000565038 IFT52Q9Y366 437 aa2.69□□□□□ -1.98
PALB2-203ENST00000565038 FAM230AA0A1W2PPH8 454 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 OR6C65A6NJZ3 312 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 ZNF705EA8MWA4 302 aaPredicted RBP2.68□□□□□ -1.98
PALB2-203ENST00000565038 DUX1O43812 170 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 CA11O75493 328 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 TOM1L1O75674 476 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 HBQ1P09105 142 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 PSG2P11465 335 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 BTDP43251 543 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 MAGEA5P43359 124 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 BDKRB1P46663 353 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 ATXN3P54252 364 aaPredicted RBP2.68□□□□□ -1.98
PALB2-203ENST00000565038 STARD6P59095 220 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 DAZ2Q13117 558 aaKnown RBP2.68□□□□□ -1.98
PALB2-203ENST00000565038 CFAP221Q4G0U5 840 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 ATF7IP2Q5U623 682 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 FAM220AQ7Z4H9 259 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 LCA5Q86VQ0 697 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 LINC01561Q8N1V8 128 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 OR2AP1Q8NGE2 309 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 FBXO30Q8TB52 745 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 IL22RA2Q969J5 263 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 PINX1Q96BK5 328 aaKnown RBP2.68□□□□□ -1.98
PALB2-203ENST00000565038 HPDLQ96IR7 371 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 CYP2S1Q96SQ9 504 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 PPDPFQ9H3Y8 114 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 RHOJQ9H4E5 214 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 NARFLQ9H6Q4 476 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 POLD4Q9HCU8 107 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 DAZ3Q9NR90 486 aaKnown RBP2.68□□□□□ -1.98
PALB2-203ENST00000565038 NINJ2Q9NZG7 142 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 CYTH4Q9UIA0 394 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 CUX2O14529 1486 aa2.68□□□□□ -1.98
PALB2-203ENST00000565038 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 H3BMQ9 156 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 BBOX1O75936 387 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 PTBP3O95758 552 aaKnown RBP2.67□□□□□ -1.98
PALB2-203ENST00000565038 VDRP11473 427 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 SERPINA2P20848 420 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 PAICSP22234 425 aaKnown RBP2.67□□□□□ -1.98
PALB2-203ENST00000565038 HOXD10P28358 340 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 HPDP32754 393 aaPredicted RBP2.67□□□□□ -1.98
PALB2-203ENST00000565038 RAET1GQ6H3X3 334 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 PLBD1Q6P4A8 553 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 ZCCHC12Q6PEW1 402 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 LHFPL4Q7Z7J7 247 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 OR52B4Q8NGK2 314 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 OR9A1PQ8NGU1 263 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 MS4A14Q96JA4 679 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 TESK2Q96S53 571 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 DBNDD1Q9H9R9 158 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 RDH8Q9NYR8 311 aa2.67□□□□□ -1.98
PALB2-203ENST00000565038 RAI1Q7Z5J4 1906 aaPredicted RBP2.67□□□□□ -1.98
PALB2-203ENST00000565038 CDC42BPBQ9Y5S2 1711 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 A0A0U1RQV5 110 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 RNF103-CHMP3A0A140T963 221 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.66□□□□□ -1.98
PALB2-203ENST00000565038 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.66□□□□□ -1.98
PALB2-203ENST00000565038 PDHBP11177 359 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 PTGFRP43088 359 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 APOC4P55056 127 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 TRIP10Q15642 601 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 NDUFA9Q16795 377 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 IGFL3Q6UXB1 125 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 ISLR2Q6UXK2 745 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 CBWD2Q8IUF1 395 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 C20orf203Q8NBC4 194 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 ZNF740Q8NDX6 193 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 OR52I1Q8NGK6 324 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 RDH5Q92781 318 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 MRPL38Q96DV4 380 aaKnown RBP2.66□□□□□ -1.98
PALB2-203ENST00000565038 C14orf79Q96F83 325 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 TMEM101Q96IK0 257 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 OR5B2Q96R09 309 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 RSPH9Q9H1X1 276 aaPredicted RBP2.66□□□□□ -1.98
PALB2-203ENST00000565038 NXF3Q9H4D5 531 aaKnown RBP2.66□□□□□ -1.98
PALB2-203ENST00000565038 VAT1LQ9HCJ6 419 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 AGPAT5Q9NUQ2 364 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 MRPL39Q9NYK5 338 aaKnown RBP2.66□□□□□ -1.98
PALB2-203ENST00000565038 ATXN10Q9UBB4 475 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 ANAPC7Q9UJX3 599 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 KLK12Q9UKR0 248 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 SCML2Q9UQR0 700 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 RNF6Q9Y252 685 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 PLLPQ9Y342 182 aa2.66□□□□□ -1.98
PALB2-203ENST00000565038 PLEKHG1Q9ULL1 1385 aa2.65□□□□□ -1.98
PALB2-203ENST00000565038 A0A1B0GUA9 196 aa2.65□□□□□ -1.99
PALB2-203ENST00000565038 SDHDO14521 159 aa2.65□□□□□ -1.99
PALB2-203ENST00000565038 RASGRF2O14827 1237 aa2.65□□□□□ -1.99
PALB2-203ENST00000565038 STX7O15400 261 aaKnown RBP2.65□□□□□ -1.99
PALB2-203ENST00000565038 TRAF3IP2O43734 574 aaPredicted RBP2.65□□□□□ -1.99
PALB2-203ENST00000565038 VPS26AO75436 327 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms