RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FAM129CQ86XR2 697 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR6M1Q8NGM8 313 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR5J2Q8NH18 312 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TIFAQ96CG3 184 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR2M2Q96R28 347 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZDHHC5Q9C0B5 715 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 UBQLN3Q9H347 655 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CA10Q9NS85 328 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NPIPA5A0A0B4J1W7 369 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CENPVL1A0A0U1RR11 272 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PRR23D1E9PI22 279 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NPIPA7E9PJI5 369 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NPIPA8P0DM63 369 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PRR23D2P0DMB1 279 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TYRP14679 529 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TGM3Q08188 693 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OPCMLQ14982 345 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CD300LDQ6UXZ3 194 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NHLRC1Q6VVB1 395 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZNF793Q6ZN11 406 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR2T33Q8NG76 320 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZNF436Q9C0F3 470 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ERVMER34-1Q9H9K5 563 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MCCC2Q9HCC0 563 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SLC35C2Q9NQQ7 365 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SDHAF2Q9NX18 166 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SLC23A2Q9UGH3 650 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SDK1Q7Z5N4 2213 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 IRGMA1A4Y4 181 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ARPC1BO15143 372 aaKnown RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SMAD9O15198 467 aaKnown RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 HTR1FP30939 366 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PYHIN1Q6K0P9 492 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 UBE3DQ7Z6J8 389 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NUDT13Q86X67 352 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR51Q1Q8NH59 317 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PFN4Q8NHR9 129 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TFGQ92734 400 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GHSRQ92847 366 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TCEAL4Q96EI5 215 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 DERL3Q96Q80 235 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TIMP4Q99727 224 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MGAT4CQ9UBM8 478 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 KLK11Q9UBX7 282 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZNF69Q9UC07 566 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 HCFC2Q9Y5Z7 792 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 WNT6Q9Y6F9 365 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SLC9A3R1O14745 358 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NDUFS4O43181 175 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PLATP00750 562 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 UCHL1P09936 223 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RBMS1P29558 406 aaKnown RBP19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RAD52P43351 418 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MTNR1BP49286 362 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ST3GAL3Q11203 375 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 C6orf132Q5T0Z8 1188 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 HES5Q5TA89 166 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR9A2Q8NGT5 310 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RAD51AP1Q96B01 352 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SEMA4CQ9C0C4 833 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ISYNA1Q9NPH2 558 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ATG4BQ9Y4P1 393 aa19.09■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR5F1O95221 314 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PRG2P13727 222 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 IFNGR2P38484 337 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GDNFP39905 211 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RIN1Q13671 783 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 LY6G5CQ5SRR4 150 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SSX6Q7RTT6 188 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR52B4Q8NGK2 314 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ING5Q8WYH8 240 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 KLHL15Q96M94 604 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 POLMQ9NP87 494 aaPredicted RBP19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 C20orf141Q9NUB4 165 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ASB6Q9NWX5 421 aa19.08■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MEIKINA0A087WXM9 373 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ANXA7P20073 488 aaKnown RBP19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 RAB3BP20337 219 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 HTR3DQ70Z44 454 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PARS2Q7L3T8 475 aaKnown RBP19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 BOLLQ8N9W6 283 aaKnown RBP19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TOR1AIP2Q8NFQ8 470 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ACOT12Q8WYK0 555 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 OSTF1Q92882 214 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TRMT2BQ96GJ1 504 aaKnown RBP19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TOE1Q96GM8 510 aaKnown RBP19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ERMAPQ96PL5 475 aaPredicted RBP19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 AIF1LQ9BQI0 150 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TEX12Q9BXU0 123 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SLC25A18Q9H1K4 315 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 C20orf85Q9H1P6 137 aa19.08■□□□□ 0.64
MAP1LC3B-206ENST00000564844 G3V3Q6 166 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 KDM4BO94953 1096 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 GDF7Q7Z4P5 450 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ADIPOR2Q86V24 386 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 OR4N5Q8IXE1 308 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 UBE2E3Q969T4 207 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 CNRIP1Q96F85 164 aaPredicted RBP19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TRIM36Q9NQ86 728 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 MRPL39Q9NYK5 338 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms