RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 AKIRIN1Q9H9L7 192 aaPredicted RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 PALMDQ9NP74 551 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 GSN-AS1Q9NRJ2 163 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 VPS54Q9P1Q0 977 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 MAD2L2Q9UI95 211 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 FBXW2Q9UKT8 454 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 WDR83OSQ9Y284 106 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 MTF2Q9Y483 593 aaPredicted RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 IKBKGQ9Y6K9 419 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 LRRC37A2A6NM11 1700 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 PRRC2AP48634 2157 aaKnown RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 MYH7BA7E2Y1 1941 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 SIP14410 1827 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CHD7Q9P2D1 2997 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 PTPRZ1P23471 2315 aaPredicted RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 RALGAPA2Q2PPJ7 1873 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 IGKV6D-21A0A0A0MT36 114 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 A0A0B4J203 849 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TRBV4-1A0A0J9YWV2 114 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 RNF103-CHMP3A0A140T963 221 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 A0A1W2PPW3 197 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TMEM120BA0PK00 339 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 ZNF840PA6NDX5 716 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CASTOR2A6NHX0 329 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SYCE1LA8MT33 242 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 E9PMD0 336 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 G3V2L1 256 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 H3BSA7 217 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 RNF103O00237 685 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 KPNA4O00629 521 aaPredicted RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 MAGEB2O15479 319 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 GLCEO94923 617 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 KRT6AP02538 564 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 KRT6BP04259 564 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SERPING1P05155 500 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 PLEKP08567 350 aaPredicted RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 KRT3P12035 628 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 GAP43P17677 238 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 AOC1P19801 751 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TAC1P20366 129 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 AZGP1P25311 298 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 PSMB4P28070 264 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CASP1P29466 404 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 GNA11P29992 359 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 IFNA8P32881 189 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CTNNB1P35222 781 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 LONP1P36776 959 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 PPP1R2P41236 205 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CD86P42081 329 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SLCO1A2P46721 670 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 KLK7P49862 253 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 RAP1GDS1P52306 607 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 PLTPP55058 493 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 VCPP55072 806 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 YBEYP58557 167 aaPredicted RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 BASP1P80723 227 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 IL1RL1Q01638 556 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 DR1Q01658 176 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 FOLH1Q04609 750 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 LRRC63Q05C16 580 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 GFPT1Q06210 699 aaPredicted RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 TRA2AQ13595 282 aaKnown RBP eCLIP3.25□□□□□ -1.89
CHD9-212ENST00000564641 OPCMLQ14982 345 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 ZNF146Q15072 292 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 PPA1Q15181 289 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 NONOQ15233 471 aaKnown RBP eCLIP3.25□□□□□ -1.89
CHD9-212ENST00000564641 RGS21Q2M5E4 152 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 ANKDD1AQ495B1 522 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 NADK2Q4G0N4 442 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TOR1AIP1Q5JTV8 583 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CELF3Q5SZQ8 465 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 FHL5Q5TD97 284 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TWF2Q6IBS0 349 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 ETFRF1Q6IPR1 90 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SPOPLQ6IQ16 392 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 C4orf22Q6V702 233 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TRMT10CQ7L0Y3 403 aaKnown RBP3.25□□□□□ -1.89
CHD9-212ENST00000564641 PEX26Q7Z412 305 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 GPR141Q7Z602 305 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SERINC5Q86VE9 423 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 AMIGO1Q86WK6 493 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CATSPER3Q86XQ3 398 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 OR4N5Q8IXE1 308 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 KLHDC8AQ8IYD2 350 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SYCE1Q8N0S2 351 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CENPSQ8N2Z9 138 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TRIML2Q8N7C3 387 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 RAB3IL1Q8TBN0 382 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SLC26A7Q8TE54 656 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SCFD1Q8WVM8 642 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 TOP1MTQ969P6 601 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 SGF29Q96ES7 293 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 BIRC8Q96P09 236 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 ERGIC2Q96RQ1 377 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 CYTH2Q99418 400 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 ERP44Q9BS26 406 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 C1orf21Q9H246 121 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 BLZF1Q9H2G9 400 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 PSTPIP2Q9H939 334 aa3.25□□□□□ -1.89
CHD9-212ENST00000564641 PXMP2Q9NR77 195 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms