RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	ANGPTL8	Q6UXH0	198 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF550	Q7Z398	422 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	C1QL2	Q7Z5L3	287 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	GPR180	Q86V85	440 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	LAS2	Q8IYD9	372 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	TAGAP	Q8N103	731 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	SNX31	Q8N9S9	440 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	MAPK1IP1L	Q8NDC0	245 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	SRFBP1	Q8NEF9	429 aa	Known RBP	4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	TRIM58	Q8NG06	486 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	OR7G3	Q8NG95	312 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	OR1J4	Q8NGS1	313 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	SCARB1	Q8WTV0	552 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	IGFBPL1	Q8WX77	278 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	TANK	Q92844	425 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	ADIPOR1	Q96A54	375 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	CTHRC1	Q96CG8	243 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	PIK3IP1	Q96FE7	263 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	TMEM41A	Q96HV5	264 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	VPS39	Q96JC1	886 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	MARK4	Q96L34	752 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	NODAL	Q96S42	347 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	KRT12	Q99456	494 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	NAT9	Q9BTE0	207 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	EFCAB11	Q9BUY7	163 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	ALG8	Q9BVK2	526 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	SFXN3	Q9BWM7	321 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF717	Q9BY31	904 aa	Predicted RBP	4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	ROGDI	Q9GZN7	287 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	DERL2	Q9GZP9	239 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	CAB39L	Q9H9S4	337 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	MS4A12	Q9NXJ0	267 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	VSX1	Q9NZR4	365 aa	Predicted RBP	4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	FETUB	Q9UGM5	382 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	NDRG3	Q9UGV2	375 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	PTBP2	Q9UKA9	531 aa	Known RBP	4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	CHMP2B	Q9UQN3	213 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	DTX4	Q9Y2E6	619 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	ASB4	Q9Y574	426 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	TEX264	Q9Y6I9	313 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	SPACA6	W5XKT8	324 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	FREM1	Q5H8C1	2179 aa		4.65	□□□□□ -1.67
TCF4-223	ENST00000564343	STAB1	Q9NY15	2570 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343		A0A0A6YYD5	115 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343		A0A1W2PNV4	684 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	RNF212B	A8MTL3	300 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343		B4DXG7	233 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343		H0Y3Z8	333 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	PLOD2	O00469	737 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CES2	O00748	559 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	PGRMC2	O15173	223 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	TRIAP1	O43715	76 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	TMPRSS11D	O60235	418 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CCNT2	O60583	730 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ICOSLG	O75144	302 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	EED	O75530	441 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	SOX30	O94993	753 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	AIFM1	O95831	613 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	GBA	P04062	536 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ABCB1	P08183	1280 aa	Predicted RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	KIT	P10721	976 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CD1D	P15813	335 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	S1PR1	P21453	382 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CRYGS	P22914	178 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ABCD3	P28288	659 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	GALNS	P34059	522 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	BSG	P35613	385 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	UGT2B10	P36537	528 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	LHX2	P50458	406 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CLDN18	P56856	261 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	IRF8	Q02556	426 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	FUT7	Q11130	342 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	TNK1	Q13470	666 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	DDX39B	Q13838	428 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	FASTKD3	Q14CZ7	662 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	PPP1R7	Q15435	360 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	TBCC	Q15814	346 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	NNAT	Q16517	81 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	PAGE2B	Q5JRK9	111 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	FAM209B	Q5JX69	171 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	DEPDC1	Q5TB30	811 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	STEAP4	Q687X5	459 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	SUMO4	Q6EEV6	95 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	HIST2H2AA3	Q6FI13	130 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	SULT1C3	Q6IMI6	304 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	HMBOX1	Q6NT76	420 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	MED27	Q6P2C8	311 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	AMIGO2	Q86SJ2	522 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	GAS2L3	Q86XJ1	694 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	FAM90A1	Q86YD7	464 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	GPSM1	Q86YR5	675 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	TCAIM	Q8N3R3	496 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF615	Q8N8J6	731 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	RNF152	Q8N8N0	203 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	WDSUB1	Q8N9V3	476 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	HUS1B	Q8NHY5	278 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms