RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 KITP10721 976 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 IL11P20809 199 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 MATN1P21941 496 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 EIF1AXP47813 144 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 CLNS1AP54105 237 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 ATP12AP54707 1039 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 FOXF1Q12946 379 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 CTU2Q2VPK5 515 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 FAM174BQ3ZCQ3 159 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 PPP4R4Q6NUP7 873 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 CBLN3Q6UW01 205 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 MTERF4Q7Z6M4 381 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 ADGRG7Q96K78 797 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 TEX37Q96LM6 180 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 HOXD1Q9GZZ0 328 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 CLEC4MQ9H2X3 399 aaPredicted RBP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 WDR55Q9H6Y2 383 aaPredicted RBP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 RNF122Q9H9V4 155 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 AIG1Q9NVV5 245 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 NKIRAS1Q9NYS0 192 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 PCDHGB4Q9UN71 923 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 CARD8Q9Y2G2 431 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 MPDZO75970 2070 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 PRSS51A0A1B0GVH4 220 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 FAM221AA4D161 298 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 A8MXE2 369 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 E9PBE3 544 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 SOX30O94993 753 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 LINGO3P0C6S8 592 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 EPHA3P29320 983 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 KIR2DL2P43627 348 aaPredicted RBP17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 SLC6A8P48029 635 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 UFM1P61960 85 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 EEF1A1P68104 462 aaKnown RBP17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 SGCBQ16585 318 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 ANXA8L1Q5VT79 327 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 EEF1A1P5Q5VTE0 462 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 BTLAQ7Z6A9 289 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 WDR75Q8IWA0 830 aaKnown RBP17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 CHDHQ8NE62 594 aaPredicted RBP17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 OR10D3Q8NH80 312 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 SDF2Q99470 211 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 OPN3Q9H1Y3 402 aaPredicted RBP17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 OR51I1Q9H343 314 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 DTNAQ9Y4J8 743 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 AKAP6Q13023 2319 aa17.94■□□□□ 0.46
SHCBP1-203ENST00000564272 CENPVL1A0A0U1RR11 272 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 H3BNH8 94 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 TNFSF11O14788 317 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 MSTNO14793 375 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 HDAC3O15379 428 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 NUDT14O95848 222 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 EPXP11678 715 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 UQCRC2P22695 453 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 IL12AP29459 219 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 DNAJA1P31689 397 aaKnown RBP17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 SLC18A1P54219 525 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 CASP8Q14790 479 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 DAZAP2Q15038 168 aaPredicted RBP17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 TESK1Q15569 626 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 PDZK1Q5T2W1 519 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 TNFAIP8L2Q6P589 184 aaPredicted RBP17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 LIME1Q9H400 295 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 STOML1Q9UBI4 398 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 ICAM5Q9UMF0 924 aa17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 HRNRQ86YZ3 2850 aaPredicted RBP17.93■□□□□ 0.46
SHCBP1-203ENST00000564272 DUXAA6NLW8 204 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 TRPC5OSA6NMA1 111 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 GTPBP1O00178 669 aaKnown RBP17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 CXCL13O43927 109 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 FCMRO60667 390 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 AK1P00568 194 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 C1QCP02747 245 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 FCGR2AP12318 317 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 SHC1P29353 583 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 S100A3P33764 101 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 P2RX1P51575 399 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 SUMO3P55854 103 aaPredicted RBP17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 RAC1P63000 192 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 OCRLQ01968 901 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 GUSBP1Q15486 140 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 GPR68Q15743 365 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 TOMM34Q15785 309 aaPredicted RBP17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 DPY19L1Q2PZI1 675 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 SAXO2Q658L1 398 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 ATG16L1Q676U5 607 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 C16orf62Q7Z3J2 963 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 SPATA19Q7Z5L4 167 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 CDC20BQ86Y33 519 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 TMCO5AQ8N6Q1 288 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 VPS37AQ8NEZ2 397 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 RFWD2Q8NHY2 731 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 RAB3IL1Q8TBN0 382 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 MIPOL1Q8TD10 442 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 ARSGQ96EG1 525 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 NMUR2Q9GZQ4 415 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 MANSC1Q9H8J5 431 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 KCNE5Q9UJ90 142 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 MKLN1Q9UL63 735 aa17.92■□□□□ 0.46
SHCBP1-203ENST00000564272 CLEC4AQ9UMR7 237 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms