RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TPM4P67936 248 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 PLCXD2Q0VAA5 305 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 HBMQ6B0K9 141 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 LRRC6Q86X45 466 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 C1orf174Q8IYL3 243 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 NKAPQ8N5F7 415 aaKnown RBP8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 NUP37Q8NFH4 326 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 OR10S1Q8NGN2 331 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 DPF1Q92782 380 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 MAPKAP1Q9BPZ7 522 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 KCNS3Q9BQ31 491 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 KATNB1Q9BVA0 655 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 PCDHAC1Q9H158 963 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 BCO1Q9HAY6 547 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 TMEM165Q9HC07 324 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 CATSPERZQ9NTU4 200 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 KCNG2Q9UJ96 466 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 ZKSCAN5Q9Y2L8 839 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 AMDHD2Q9Y303 409 aa8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 GPC6Q9Y625 555 aaPredicted RBP8.97□□□□□ -0.97
HDGFL3-204ENST00000563790 A0A0J9YW62 118 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 OR6C70A6NIJ9 312 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 ADARB2-AS1A8MUL3 147 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 ZBTB14O43829 449 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 EEDO75530 441 aaKnown RBP8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 NCR1O76036 304 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 PRKD3O94806 890 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 CRYAAP02489 173 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 GPX3P22352 226 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 NMBRP28336 390 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 GALNSP34059 522 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 VEGFCP49767 419 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 CLCN7P51798 805 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 PLA2G16P53816 162 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 PRAMEP78395 509 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 CRADDP78560 199 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 PAX8Q06710 450 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 SP140Q13342 867 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 NAE1Q13564 534 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 LARS2Q15031 903 aaKnown RBP8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 NNATQ16517 81 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 MSS51Q4VC12 460 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 ZBTB37Q5TC79 503 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 DHRS7BQ6IAN0 325 aaPredicted RBP8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 C11orf88Q6PI97 169 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 AGTRAPQ6RW13 159 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 BRD3OSQ6XYD6 125 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 NDUFA11Q86Y39 141 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 CNGA4Q8IV77 575 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 MPP5Q8N3R9 675 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 CEP112Q8N8E3 955 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 OR2L5Q8NG80 312 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 OR4F15Q8NGB8 312 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 OSTF1Q92882 214 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 RAB8BQ92930 207 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 C1GALT1C1Q96EU7 318 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 ANKRD27Q96NW4 1050 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 ATOH8Q96SQ7 321 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 CHID1Q9BWS9 393 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 MEGF9Q9H1U4 602 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 MS4A5Q9H3V2 200 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 PPP4R1LQ9P1A2 415 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 ACTL7BQ9Y614 415 aa8.96□□□□□ -0.98
HDGFL3-204ENST00000563790 DNAH6Q9C0G6 4158 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 VSTM5A8MXK1 200 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 AKR1B15C9JRZ8 316 aaPredicted RBP8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 ACOX3O15254 700 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 SYNGR3O43761 229 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 IGHMP01871 453 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 ETS1P14921 441 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 THBS4P35443 961 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 FEN1P39748 380 aaKnown RBP8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 MAGEA8P43361 318 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 EFNB2P52799 333 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 CYHR1Q6ZMK1 362 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 CENPUQ71F23 418 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 C17orf78Q8N4C9 275 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 BHLHE22Q8NFJ8 381 aaPredicted RBP8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 FAM136AQ96C01 138 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 LRRC45Q96CN5 670 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 SNF8Q96H20 258 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 SIGLEC10Q96LC7 697 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 OR4K3Q96R72 315 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 NDNQ99608 321 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 CD244Q9BZW8 370 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 OR10A5Q9H207 317 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 ACSS3Q9H6R3 686 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 COPS7BQ9H9Q2 264 aaPredicted RBP8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 SLC17A5Q9NRA2 495 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 REV1Q9UBZ9 1251 aa8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 PACSIN2Q9UNF0 486 aaPredicted RBP8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 NUP214P35658 2090 aaPredicted RBP8.95□□□□□ -0.98
HDGFL3-204ENST00000563790 IGHV1-18A0A0C4DH31 117 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 SHISA8B8ZZ34 492 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 CLGNO14967 610 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 TPM3P06753 285 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 ENPP1P22413 925 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 MYF6P23409 242 aa8.94□□□□□ -0.98
HDGFL3-204ENST00000563790 FDFT1P37268 417 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms