RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 HOOK1Q9UJC3 728 aaKnown RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 RABL2BQ9UNT1 228 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 KLHDC2Q9Y2U9 406 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 MTF2Q9Y483 593 aaPredicted RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 USP16Q9Y5T5 823 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 ANKRD36CQ5JPF3 1778 aa2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 SMG6Q86US8 1419 aaKnown RBP2.15□□□□□ -2.07
HDGFL3-202ENST00000562702 NPC1L1Q9UHC9 1359 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 KDM3BQ7LBC6 1761 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 PAPPA2Q9BXP8 1791 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 C19orf81C9J6K1 198 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 IGSF6O95976 241 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 ABHD2P08910 425 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 HMOX1P09601 288 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 SDC1P18827 310 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 ELK1P19419 428 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 ZP3P21754 424 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 IGHV1-2P23083 117 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 ACVR1BP36896 505 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 EPS15P42566 896 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 SSR1P43307 286 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 TRPC1P48995 793 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 NUMBP49757 651 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 STK19P49842 368 aaPredicted RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 HNRNPFP52597 415 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 CASP9P55211 416 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 RAG2P55895 527 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 STX17P56962 302 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 GFPT1Q06210 699 aaPredicted RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 TMED1Q13445 227 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 BTG3Q14201 252 aaPredicted RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 CARTPTQ16568 116 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 HERC4Q5GLZ8 1057 aaPredicted RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF544Q6NX49 715 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 CNSTQ6PJW8 725 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 TFAP2EQ6VUC0 442 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 YRDCQ86U90 279 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 CENPSQ8N2Z9 138 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 C14orf178Q8N769 122 aaPredicted RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 SPC24Q8NBT2 197 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 SETD7Q8WTS6 366 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 DNAJA3Q96EY1 480 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF560Q96MR9 790 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 CBWD1Q9BRT8 395 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 DPH7Q9BTV6 452 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 NACA2Q9H009 215 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 CARD9Q9H257 536 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 NDUFA13Q9P0J0 144 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 XPO7Q9UIA9 1087 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 BARX2Q9UMQ3 279 aaPredicted RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 PDE10AQ9Y233 779 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 RPH3AQ9Y2J0 694 aaPredicted RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 TDRKHQ9Y2W6 561 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 FKBP7Q9Y680 259 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 PSME4Q14997 1843 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 DDX60Q8IY21 1712 aaKnown RBP2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 MRC1P22897 1456 aa2.14□□□□□ -2.07
HDGFL3-202ENST00000562702 DOCK3Q8IZD9 2030 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 LAMB4A4D0S4 1761 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 KIF24Q5T7B8 1368 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 KIAA0100Q14667 2235 aaKnown RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 SYNJ2BP-COX16A0A087WUM0 186 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 NOL3O60936 208 aaKnown RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 SDC3O75056 442 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 STK17BO94768 372 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 CXCL14O95715 111 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 PGK1P00558 417 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 GNSP15586 552 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 PSMB1P20618 241 aaKnown RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 RPA1P27694 616 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 EPHX2P34913 555 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 POU3F4P49335 361 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 WNT4P56705 351 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 RIPPLY3P57055 190 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 SRP54P61011 504 aaKnown RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 PUDPQ08623 228 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 IL18R1Q13478 541 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 LASP1Q14847 261 aaKnown RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 CAMK4Q16566 473 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 DEFB115Q30KQ5 88 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 ZNF528Q3MIS6 628 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 ACSF3Q4G176 576 aaPredicted RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 SBK1Q52WX2 424 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 HSP90AA5PQ58FG0 334 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 ETFRF1Q6IPR1 90 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 MOB1BQ7L9L4 216 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 GOLGA7Q7Z5G4 137 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 CNTN4Q8IWV2 1026 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 LRRC17Q8N6Y2 441 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 PHYHIPQ92561 330 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 KRT35Q92764 455 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 ATP6V0A1Q93050 837 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 SNX21Q969T3 373 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 C16orf45Q96MC5 204 aaPredicted RBP2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 NDUFAF3Q9BU61 184 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 CARD6Q9BX69 1037 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 FTHL17Q9BXU8 183 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 ELOVL2Q9NXB9 296 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 CYP39A1Q9NYL5 469 aa2.13□□□□□ -2.07
HDGFL3-202ENST00000562702 MBD2Q9UBB5 411 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms