RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 UBL4AP11441 157 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 OPRM1P35372 400 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 IDH3AP50213 366 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 P2RX1P51575 399 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF136P52737 540 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 TPD52P55327 224 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 TFF3Q07654 80 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 NDUFAF6Q330K2 333 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 TIGD2Q4W5G0 525 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 PDZK1Q5T2W1 519 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 SAXO2Q658L1 398 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 RNF130Q86XS8 419 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 CHDHQ8NE62 594 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR9I1Q8NGQ6 314 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZBTB8AQ96BR9 441 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 ROPN1LQ96C74 230 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 THOC1Q96FV9 657 aaKnown RBP11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 RNF145Q96MT1 663 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 EBF4Q9BQW3 602 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 PRRG4Q9BZD6 226 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 TMEM185BQ9H7F4 350 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 SDR39U1Q9NRG7 319 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 MED17Q9NVC6 651 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 WDR45Q9Y484 360 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 AP4B1Q9Y6B7 739 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 NBPF19A0A087WUL8 3843 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF264O43296 627 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 TNFRSF21O75509 655 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 KRT75O95678 551 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CSTAP01040 98 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF17P17021 662 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 EIF1AXP47813 144 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CPA2P48052 419 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ASCL1P50553 236 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 SUCLG1P53597 346 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CLDN15P56746 228 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CLDN20P56880 219 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 SNTB1Q13884 538 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 PLPPR5Q32ZL2 321 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CBLN3Q6UW01 205 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CNEP1R1Q8N9A8 125 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 RELL2Q8NC24 303 aaPredicted RBP11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ATP6V1C2Q8NEY4 427 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 TOR1AIP2Q8NFQ8 470 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CKAP2Q8WWK9 683 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 VPS33AQ96AX1 596 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ITCHQ96J02 903 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 MAGEB18Q96M61 343 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZFP3Q96NJ6 502 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 TRIM8Q9BZR9 551 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 NMUR2Q9GZQ4 415 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ENKD1Q9H0I2 346 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
CTDSPL2-209ENST00000560620 ADGRG4Q8IZF6 3080 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 PKDREJQ9NTG1 2253 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 FAM234BA2RU67 622 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 SERINC4A6NH21 518 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 RCBTB2O95199 551 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 TGM6O95932 706 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 UBTFL6P0CB48 400 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 NR2F1P10589 423 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 NCF2P19878 526 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 SSTR2P30874 369 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 EIF1P41567 113 aaKnown RBP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 CRATP43155 626 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 FOXF1Q12946 379 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 FOXF2Q12947 444 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 CBFBQ13951 182 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 PON3Q15166 354 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 PDSS1Q5T2R2 415 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 OR2A2Q6IF42 318 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 HEPHL1Q6MZM0 1159 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 EIF3MQ7L2H7 374 aaKnown RBP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 HMGN2P46Q86SG4 172 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 ADGRE4PQ86SQ3 457 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 GTPBP8Q8N3Z3 284 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF845Q96IR2 970 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 NPAS1Q99742 590 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF559Q9BR84 538 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF350Q9GZX5 532 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 CCDC167Q9P0B6 97 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 INTS1Q8N201 2190 aaKnown RBP11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 NAV2Q8IVL1 2488 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 DOCK7Q96N67 2140 aa11.69□□□□□ -0.54
CTDSPL2-209ENST00000560620 NPIPB9F8W1W9 429 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 HMGN4O00479 90 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 NR5A2O00482 541 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 TNFSF11O14788 317 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 OIP5O43482 229 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 KIAA0513O60268 411 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 EIF4E2O60573 245 aaKnown RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 UGT2B17O75795 530 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 SYNGR4O95473 234 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 H6PDO95479 791 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms