RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 CPSF6Q16630 551 aaKnown RBP eCLIP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 FAM69AQ5T7M9 428 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 RPL13AP3Q6NVV1 102 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 CRTC1Q6UUV9 634 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 EGFL8Q99944 293 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 POLR2J3Q9H1A7 115 aaKnown RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 FGF20Q9NP95 211 aaPredicted RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 TMEM161AQ9NX61 479 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 ENPP4Q9Y6X5 453 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 PDYNP01213 254 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 OR8U8P0C7N1 319 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 COX7A2P14406 83 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 MGMTP16455 207 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ZNF14P17017 642 aaPredicted RBP17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 GJA1P17302 382 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ANXA7P20073 488 aaKnown RBP17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 BDKRB2P30411 391 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 GDNFP39905 211 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 HTR5AP47898 357 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 GAS1P54826 345 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 WNT3P56703 355 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 DAOAP59103 153 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 RAB40BQ12829 278 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 SF1Q15637 639 aaKnown RBP17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 AFMIDQ63HM1 303 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ZNF626Q68DY1 528 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 RNF165Q6ZSG1 346 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 GPRIN1Q7Z2K8 1008 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 REC114Q7Z4M0 266 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 OR5M1Q8NGP8 315 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 SLAMF9Q96A28 289 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 RGMAQ96B86 450 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 APOLD1Q96LR9 279 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ELOVL2Q9NXB9 296 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 OR10H3O60404 316 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 EOMESO95936 686 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 USP17L7P0C7H9 530 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ACP2P11117 423 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ABOP16442 354 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 LAG3P18627 525 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 IDSP22304 550 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 CRATP43155 626 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 DLX5P56178 289 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 C10orf91Q5T1B1 145 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 SFXN4Q6P4A7 337 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 CLEC20AQ6ZU45 233 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 PRSS45Q7RTY3 260 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ZNF561Q8N587 486 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 ZNF383Q8NA42 475 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 EBPLQ9BY08 206 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 AUNIPQ9H7T9 357 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 NOX3Q9HBY0 568 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 KLHL1Q9NR64 748 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 C2orf42Q9NWW7 574 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 RCE1Q9Y256 329 aa17.89■□□□□ 0.45
SEMA4B-215ENST00000560089 URADA6NGE7 173 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 TAPBPO15533 448 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 TSPAN3O60637 253 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 RPA2P15927 270 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 ITGA3P26006 1051 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 CDKN1CP49918 316 aaPredicted RBP17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 RENBPP51606 427 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 HCCSP53701 268 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 OR10A3P58181 314 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 TMEM173Q86WV6 379 aaPredicted RBP17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 KCTD13Q8WZ19 329 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 TM6SF2Q9BZW4 377 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 OSER1Q9NX31 292 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 WWOXQ9NZC7 414 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 DHRS7Q9Y394 339 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 IRGMA1A4Y4 181 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 CLDN4O14493 209 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 CCR9P51686 369 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 AP1S1P61966 158 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 PPIAP62937 165 aaKnown RBP17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 SRSF11Q05519 484 aaKnown RBP17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 KIAA1161Q6NSJ0 714 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 OR2W3Q7Z3T1 314 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 OR5J2Q8NH18 312 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 ART5Q96L15 291 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 ASB6Q9NWX5 421 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 STOX2Q9P2F5 926 aaPredicted RBP17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 CORO2BQ9UQ03 480 aa17.88■□□□□ 0.45
SEMA4B-215ENST00000560089 NYNRINQ9P2P1 1898 aaKnown RBP17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 UPK3BL1B0FP48 263 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 UPK3BL2E5RIL1 263 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 ANHXE9PGG2 379 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 SMAD6O43541 496 aaKnown RBP17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 EIF4E2O60573 245 aaKnown RBP17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 KHDRBS3O75525 346 aaKnown RBP17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 ITGA10O75578 1167 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 LHX1P48742 406 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 H2BFSP57053 126 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 SLC10A7Q0GE19 358 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 GINS1Q14691 196 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 TMEM71Q6P5X7 295 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 FBXO15Q8NCQ5 510 aaPredicted RBP17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 SP7Q8TDD2 431 aaPredicted RBP17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 C14orf79Q96F83 325 aa17.87■□□□□ 0.45
SEMA4B-215ENST00000560089 PKP4Q99569 1192 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms