RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CBLL1Q75N03 491 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 KRT73Q86Y46 540 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 PEX5LQ8IYB4 626 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 BHLHE22Q8NFJ8 381 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 WDR60Q8WVS4 1066 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 C5orf34Q96MH7 638 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 TAAR6Q96RI8 345 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 KLHDC3Q9BQ90 382 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 SPATA5L1Q9BVQ7 753 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 PINK1Q9BXM7 581 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 LAT2Q9GZY6 243 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 PCDHAC1Q9H158 963 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 METTL7AQ9H8H3 244 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 ZFP64Q9NPA5 681 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF71Q9NQZ8 489 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 DCAF13Q9NV06 445 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 TUBA8Q9NY65 449 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 EGFL7Q9UHF1 273 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 MRPS18CQ9Y3D5 142 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 SNX13Q9Y5W8 968 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 HEATR5AQ86XA9 2040 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 NAV2Q8IVL1 2488 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 TCRBV5S2A0A599 114 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 KLRC4-KLRK1H3BQV0 150 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 SERPINB7O75635 380 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 PDE5AO76074 875 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 LGI1O95970 557 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 SEMG1P04279 462 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 IL7RP16871 459 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ELAVL4P26378 380 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 MSX1P28360 303 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 AQP1P29972 269 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 MSX2P35548 267 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ACAA2P42765 397 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 MEOX1P50221 254 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF136P52737 540 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 SELENOWP63302 87 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 NRF1Q16656 503 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF311Q5JNZ3 666 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 RNFT1Q5M7Z0 435 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 MRPL2Q5T653 305 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 CBLN3Q6UW01 205 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 EIF3MQ7L2H7 374 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 PLCZ1Q86YW0 608 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 SIAH3Q8IW03 269 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 CLIP4Q8N3C7 705 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 DUSP19Q8WTR2 217 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 RASSF5Q8WWW0 418 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF524Q96C55 264 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ARHGDIGQ99819 225 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 WFDC6Q9BQY6 131 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 DOHHQ9BU89 302 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 TBL1XR1Q9BZK7 514 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF703Q9H7S9 590 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 EVA1AQ9H8M9 152 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 ZDHHC11Q9H8X9 412 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 SDHAF3Q9NRP4 125 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 QPCTLQ9NXS2 382 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 KLRF1Q9NZS2 232 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 C15orf41Q9Y2V0 281 aa13.49□□□□□ -0.25
SNRPA1-207ENST00000559309 MYO18BQ8IUG5 2567 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF264O43296 627 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 NDUFB5O43674 189 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 NTN1O95631 604 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 RFPL3SP0C7P2 107 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 NCK1P16333 377 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 TCN1P20061 433 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 CLK3P49761 638 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 SUMO3P55854 103 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 GPR85P60893 370 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 KLRB1Q12918 225 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 LY6DQ14210 128 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 LARS2Q15031 903 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 TMEM44Q2T9K0 475 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 IQCCQ4KMZ1 466 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 CYBRD1Q53TN4 286 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 SLC25A53Q5H9E4 307 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 HMGN2P46Q86SG4 172 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 PACS2Q86VP3 889 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 EID3Q8N140 333 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 PHF10Q8WUB8 498 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF597Q96LX8 424 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 RNF145Q96MT1 663 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 TTTY12Q9BZ98 90 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 KLHL1Q9NR64 748 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 RLIMQ9NVW2 624 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 SEC14L3Q9UDX4 400 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 POMPQ9Y244 141 aa13.48□□□□□ -0.25
SNRPA1-207ENST00000559309 C7orf72A4D263 438 aa13.47□□□□□ -0.25
SNRPA1-207ENST00000559309 C2orf72A6NCS6 295 aa13.47□□□□□ -0.25
SNRPA1-207ENST00000559309 G3V3Y1 287 aa13.47□□□□□ -0.25
SNRPA1-207ENST00000559309 SCO2O43819 266 aa13.47□□□□□ -0.25
SNRPA1-207ENST00000559309 TPST2O60704 377 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms