RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 OR4A15Q8NGL6 344 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 OR5M9Q8NGP3 310 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 PSMA8Q8TAA3 256 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ZPLD1Q8TCW7 415 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 FAM120BQ96EK7 910 aaKnown RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 PPP1R36Q96LQ0 422 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 LRGUKQ96M69 825 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 NODALQ96S42 347 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 TTYH2Q9BSA4 534 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 KLHL4Q9C0H6 718 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 C1orf21Q9H246 121 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SLC6A15Q9H2J7 730 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 UBQLN3Q9H347 655 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 CALHM2Q9HA72 323 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SERHLQ9NQF3 203 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 PNPLA3Q9NST1 481 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 TBC1D23Q9NUY8 699 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 THUMPD1Q9NXG2 353 aaKnown RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 SPTBN1Q01082 2364 aaKnown RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 CD8B2A6NJW9 211 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 CASQ2O14958 399 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 ITM2AO43736 263 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 TNFAIP8O95379 198 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 UTS2O95399 124 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 KRT75O95678 551 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 C6orf47O95873 294 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 EPPINO95925 133 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 HMGN2P05204 90 aaKnown RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 LAMP1P11279 417 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 CPN1P15169 458 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 POU3F2P20265 443 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 TBXA2RP21731 343 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 UQCRC2P22695 453 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SSTR2P30874 369 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 OPRM1P35372 400 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 TIMP3P35625 211 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 PGM1P36871 562 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 KHKP50053 298 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ARFIP2P53365 341 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SUMO3P55854 103 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 LASP1Q14847 261 aaKnown RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 PDK3Q15120 406 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 RAET1LQ5VY80 246 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SP5Q6BEB4 398 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 UGT2A3Q6UWM9 527 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 NPSR1Q6W5P4 371 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 MSANTD1Q6ZTZ1 278 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 P4HA3Q7Z4N8 544 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SATL1Q86VE3 508 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 KIF18BQ86Y91 864 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ULK2Q8IYT8 1036 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 LILRB4Q8NHJ6 448 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ACTRT2Q8TDY3 377 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 EME1Q96AY2 570 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ZBTB8AQ96BR9 441 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SLC35G5Q96KT7 338 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 C7orf26Q96N11 449 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 PRDM14Q9GZV8 571 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 RAD21L1Q9H4I0 556 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 POLE3Q9NRF9 147 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 ZNF629Q9UEG4 869 aaPredicted RBP7.89□□□□□ -1.15
USP3-208ENST00000558285 DOPEY1Q5JWR5 2465 aa7.89□□□□□ -1.15
USP3-208ENST00000558285 DOPEY2Q9Y3R5 2298 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 ZGRF1Q86YA3 2104 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 hCG_2014768A0A024R1R8 64 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 RNF103-CHMP3A0A140T963 221 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 A0A1W2PQD3 144 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 ALG1L2C9J202 215 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 GTPBP1O00178 669 aaKnown RBP7.88□□□□□ -1.15
USP3-208ENST00000558285 FBP2O00757 339 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 UBDO15205 165 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 SNNO75324 88 aaPredicted RBP7.88□□□□□ -1.15
USP3-208ENST00000558285 ANGPTL1O95841 491 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 RFPL3SP0C7P2 107 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 SMIM18P0DKX4 95 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 ZNF17P17021 662 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 HK1P19367 917 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 DGKQP52824 942 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 ADORA2A-AS1P86434 159 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 CRYZQ08257 329 aaKnown RBP7.88□□□□□ -1.15
USP3-208ENST00000558285 STX5Q13190 355 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 WIPI1Q5MNZ9 446 aaPredicted RBP7.88□□□□□ -1.15
USP3-208ENST00000558285 NSUN5P2Q63ZY6 315 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 BICRALQ6AI39 1079 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 BLOC1S3Q6QNY0 202 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 C3P1Q6ZMU1 363 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 DHDDSQ86SQ9 333 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 RIMKLAQ8IXN7 391 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 HOXB13Q92826 284 aaPredicted RBP7.88□□□□□ -1.15
USP3-208ENST00000558285 BORCS5Q969J3 196 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 C3orf30Q96M34 536 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 PANX1Q96RD7 426 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 SORT1Q99523 831 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 TIMP4Q99727 224 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 SH3GL1Q99961 368 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 PIF1Q9H611 641 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 ARMC7Q9H6L4 198 aa7.88□□□□□ -1.15
USP3-208ENST00000558285 PROK2Q9HC23 129 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms