RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 OR7A17O14581 309 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 PIAS1O75925 651 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 LYZL6O75951 148 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 SLITRK5O94991 958 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 KCNH1O95259 989 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 GSTA2P09210 222 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 COL6A2P12110 1019 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 ZNF23P17027 643 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 PCMT1P22061 227 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 PSMA4P25789 261 aaKnown RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 CD40P25942 277 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 SSTR1P30872 391 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 GABRA3P34903 492 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 SFTPDP35247 375 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 OR3A2P47893 321 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 COMPP49747 757 aaPredicted RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 MANFP55145 182 aaKnown RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 ACTG1P63261 375 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 GALNT1Q10472 559 aaPredicted RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 ZNF155Q12901 538 aaPredicted RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 SCGB2A2Q13296 93 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 CARTPTQ16568 116 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 ZNF239Q16600 458 aaKnown RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 TMEM176BQ3YBM2 270 aaPredicted RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 PDLIM3Q53GG5 364 aaPredicted RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 KLC3Q6P597 504 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 SEZ6L2Q6UXD5 910 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 C3orf62Q6ZUJ4 267 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 CMC1Q7Z7K0 106 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 MISPQ8IVT2 679 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 ZNF100Q8IYN0 542 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 C1orf52Q8N6N3 182 aaKnown RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 OR7G2Q8NG99 324 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.57□□□□□ -1.68
SPG11-208ENST00000558155 ABHD3Q8WU67 409 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 SELENOMQ8WWX9 145 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 SLC9A6Q92581 669 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 ARL8AQ96BM9 186 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 RNF145Q96MT1 663 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 OSBPL9Q96SU4 736 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 INPP5KQ9BT40 448 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 TRMOQ9BU70 441 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 BHLHE41Q9C0J9 482 aaPredicted RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 TMEM185BQ9H7F4 350 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 BRF2Q9HAW0 419 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 MYNNQ9NPC7 610 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 MED17Q9NVC6 651 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 KLHL9Q9P2J3 617 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 VPS29Q9UBQ0 182 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 MCM8Q9UJA3 840 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 TMCO1Q9UM00 188 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 SNX6Q9UNH7 406 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 C19orf53Q9UNZ5 99 aaPredicted RBP4.57□□□□□ -1.68
SPG11-208ENST00000558155 ATP23Q9Y6H3 246 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
SPG11-208ENST00000558155 PLCE1Q9P212 2302 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 ARFGEF3Q5TH69 2177 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 IGHV4-61A0A0C4DH41 118 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GNG14A0A1W2PPG7 69 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 TCRBV9S1A1TA0A576 114 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 TMEM89A2RUT3 159 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 FAM159BA6NKW6 160 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 CCT8L1PA6NM43 557 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ZNF724A8MTY0 619 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ALG1L2C9J202 215 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 TRIM77I1YAP6 450 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 M0R1B8 84 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ZNF195O14628 629 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 SMAD9O15198 467 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 EIF3HO15372 352 aaKnown RBP eCLIP4.56□□□□□ -1.68
SPG11-208ENST00000558155 RGS14O43566 566 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 SEC31AO94979 1220 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 KLHL2O95198 593 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 VENTXO95231 258 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 PDYNP01213 254 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 IL3P08700 152 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 RBP1P09455 135 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 CTAGE8P0CG41 777 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 HPGDP15428 266 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ENPP1P22413 925 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 IGHV1-2P23083 117 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 CDC25BP30305 580 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 LCN1P31025 176 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GSTM5P46439 218 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 ZNF83P51522 516 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 NCBP2P52298 156 aaKnown RBP eCLIP4.56□□□□□ -1.68
SPG11-208ENST00000558155 CHN2P52757 468 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 RAC3P60763 192 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 DR1Q01658 176 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 CHRNEQ04844 493 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 SLC18A2Q05940 514 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 RASGEF1BQ0VAM2 473 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 SLC29A2Q14542 456 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 FASTKD3Q14CZ7 662 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 PLPPR5Q32ZL2 321 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GRAMD1BQ3KR37 738 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 VPS26BQ4G0F5 336 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GGTA1PQ4G0N0 100 aa4.56□□□□□ -1.68
SPG11-208ENST00000558155 GLE1Q53GS7 698 aaKnown RBP4.56□□□□□ -1.68
SPG11-208ENST00000558155 C1QTNF12Q5T7M4 302 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms