RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 KLHL17Q6TDP4 642 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 SHISA6Q6ZSJ9 500 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 LANCL3Q6ZV70 420 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 SATL1Q86VE3 508 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 MEX3DQ86XN8 651 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 SULF2Q8IWU5 870 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 TAGAPQ8N103 731 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 PARP8Q8N3A8 854 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 BCORP1Q8N888 145 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CNIH3Q8TBE1 160 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 SLC2A12Q8TD20 617 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 APH1BQ8WW43 257 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CNOT9Q92600 299 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 HDAC2Q92769 488 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 ADIPOR1Q96A54 375 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 ARSGQ96EG1 525 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CTRCQ99895 268 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 MESP1Q9BRJ9 268 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 FNDC11Q9BVV2 318 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 NUDT9Q9BW91 350 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 DGCR6LQ9BY27 220 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 TGIF2Q9GZN2 237 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 AKIRIN1Q9H9L7 192 aaPredicted RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 MKKSQ9NPJ1 570 aaPredicted RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 RXFP3Q9NSD7 469 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 FLRT3Q9NZU0 649 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 FTSJ1Q9UET6 329 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 PRODH2Q9UF12 536 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 SLC13A4Q9UKG4 626 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 POFUT2Q9Y2G5 429 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 GMPPBQ9Y5P6 360 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 WDFY4Q6ZS81 3184 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 BDP1A6H8Y1 2624 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 PI4KAP42356 2102 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 FRYLO94915 3013 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 IGHV3-20A0A0C4DH32 117 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 TTC36A6NLP5 189 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 OR10H3O60404 316 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 WBP4O75554 376 aaKnown RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 SOX30O94993 753 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 OR5F1O95221 314 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 OXSR1O95747 527 aaPredicted RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 CLPTM1O96005 669 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 ADAP00813 363 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 ZGLP1P0C6A0 271 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 FGF5P12034 268 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 CCL4P13236 92 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 CD59P13987 128 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 GABRB1P18505 474 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 CDH2P19022 906 aaPredicted RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 MMP11P24347 488 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 CHMP24386 653 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 CRHBPP24387 322 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 FMO3P31513 532 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 GGT2P36268 569 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 RPL5P46777 297 aaKnown RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 RFX3P48380 749 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 GSSP48637 474 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 HLCSP50747 726 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 GPR143P51810 404 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 RGS8P57771 180 aaPredicted RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 TAS2R41P59536 307 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 TUBA4AP68366 448 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 IL5RAQ01344 420 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 TRA2AQ13595 282 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPG11-204ENST00000557866 MAD2L1BPQ15013 274 aaPredicted RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 TRAM2Q15035 370 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 SF3A2Q15428 464 aaKnown RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 ZNHIT3Q15649 155 aaPredicted RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 ELAVL1Q15717 326 aaKnown RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 NSDHLQ15738 373 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 ZNF141Q15928 474 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPG11-204ENST00000557866 NADK2Q4G0N4 442 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 FLYWCH1Q4VC44 716 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 ENTPD8Q5MY95 495 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 RBM48Q5RL73 367 aaKnown RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 PDZK1Q5T2W1 519 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 TMEM236Q5W0B7 351 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 OVCH1Q7RTY7 1134 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 GDF7Q7Z4P5 450 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 NKAIN4Q8IVV8 208 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 STT3BQ8TCJ2 826 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 ADAMTS16Q8TE57 1224 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 PMM1Q92871 262 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 TMIGD2Q96BF3 282 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 CLIP3Q96DZ5 547 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 SLC41A3Q96GZ6 507 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 HRASLS5Q96KN8 279 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 SLC46A1Q96NT5 459 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 MCHR1Q99705 422 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 PRSS27Q9BQR3 290 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 UCK2Q9BZX2 261 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 OR8D2Q9GZM6 311 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 ING2Q9H160 280 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 NXF5Q9H1B4 397 aaKnown RBP6.79□□□□□ -1.32
SPG11-204ENST00000557866 KLHL28Q9NXS3 571 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 ZNF226Q9NYT6 803 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 TMCC3Q9ULS5 477 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms