RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZNF619Q8N2I2 560 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 RPRMLQ8N4K4 120 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 GTF2H4Q92759 462 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 ITPKCQ96DU7 683 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 SH3YL1Q96HL8 342 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 DOCK7Q96N67 2140 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 TRNT1Q96Q11 434 aaKnown RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 SAP130Q9H0E3 1048 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 RAD21L1Q9H4I0 556 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 CALHM2Q9HA72 323 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 TPT1P8Q9HAU6 139 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 THUMPD1Q9NXG2 353 aaKnown RBP11.31□□□□□ -0.6
SLIRP-211ENST00000557623 MKLN1Q9UL63 735 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 RNF6Q9Y252 685 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 HCFC1P51610 2035 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 HEATR5AQ86XA9 2040 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 CACNA1CQ13936 2221 aa11.31□□□□□ -0.6
SLIRP-211ENST00000557623 A0A096LPI6 279 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 OR2M5A3KFT3 312 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 TMEM247A6NEH6 219 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 SERINC4A6NH21 518 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 HSPB2A8KAH6 182 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF264O43296 627 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 KIAA0513O60268 411 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 EIF4E2O60573 245 aaKnown RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 FCMRO60667 390 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF708P17019 499 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 POU3F2P20265 443 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 HTR1EP28566 365 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 ADH7P40394 386 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 MDH1P40925 334 aaKnown RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 EIF1P41567 113 aaKnown RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 STARP49675 285 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 ZNF117Q03924 483 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 SRYQ05066 204 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 HSPB2Q16082 182 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 PDZK1Q5T2W1 519 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 NSUN5P2Q63ZY6 315 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 TYW3Q6IPR3 259 aaKnown RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 SLC2A7Q6PXP3 512 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 CHMP1BQ7LBR1 199 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 MEIOBQ8N635 442 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 TOR1AIP2Q8NFQ8 470 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 PNPT1Q8TCS8 783 aaKnown RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 PMM1Q92871 262 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 TRIB1Q96RU8 372 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 TMEM120AQ9BXJ8 343 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 PAIP1Q9H074 479 aaKnown RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 FGFR1OP2Q9NVK5 253 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 CALML5Q9NZT1 146 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 GMPR2Q9P2T1 348 aaKnown RBP11.3□□□□□ -0.6
SLIRP-211ENST00000557623 P2RX2Q9UBL9 471 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 VDAC3Q9Y277 283 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 PCDHB14Q9Y5E9 798 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 AP4B1Q9Y6B7 739 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 MED12Q93074 2177 aa11.3□□□□□ -0.6
SLIRP-211ENST00000557623 DOPEY1Q5JWR5 2465 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 KIAA1549Q9HCM3 1950 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 A0A1W2PP18 115 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 C7orf72A4D263 438 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 H3BML4 177 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 CLIC1O00299 241 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 UGT2B17O75795 530 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 H6PDO95479 791 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 NUDT14O95848 222 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 IL2RAP01589 272 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 NR2F1P10589 423 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 UBL4AP11441 157 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 PPIBP23284 216 aaKnown RBP11.29□□□□□ -0.6
SLIRP-211ENST00000557623 CRATP43155 626 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 ARFIP2P53365 341 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 CLDN18P56856 261 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 DSTNP60981 165 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 FUT5Q11128 374 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 FADDQ13158 208 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 GNA13Q14344 377 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 FGFBP1Q14512 234 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 TMEM44Q2T9K0 475 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 PLPPR5Q32ZL2 321 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 COX20Q5RI15 118 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 LRIF1Q5T3J3 769 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 ARSKQ6UWY0 536 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 EIF3MQ7L2H7 374 aaKnown RBP11.29□□□□□ -0.6
SLIRP-211ENST00000557623 GTPBP8Q8N3Z3 284 aaPredicted RBP11.29□□□□□ -0.6
SLIRP-211ENST00000557623 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 TSPEARQ8WU66 669 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 UCN2Q96RP3 112 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 TUBA1CQ9BQE3 449 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 LAT2Q9GZY6 243 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.29□□□□□ -0.6
SLIRP-211ENST00000557623 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
SLIRP-211ENST00000557623 MED17Q9NVC6 651 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms