RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ERI3O43414 337 aaKnown RBP15.16■□□□□ 0.02
SHMT2-232ENST00000557487 TMEM127O75204 238 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 RCBTB2O95199 551 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 CXCL14O95715 111 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 PDGFAP04085 211 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 THBS1P07996 1170 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 TFPIP10646 304 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 BMP7P18075 431 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 C4BPBP20851 252 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 SHC1P29353 583 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 PLBD1Q6P4A8 553 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 BTN2A1Q7KYR7 527 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 KRT74Q7RTS7 529 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 HMGN2P46Q86SG4 172 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 RANBP3LQ86VV4 465 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-232ENST00000557487 SLC43A2Q8N370 569 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 ZNF366Q8N895 744 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 LINC01555Q8NAE3 123 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 OR2L8Q8NGY9 312 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 OR8K5Q8NH50 307 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 ABHD4Q8TB40 342 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 ABHD1Q96SE0 405 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 CD180Q99467 661 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 TIMP4Q99727 224 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 OR52D1Q9H346 318 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 SLCO1C1Q9NYB5 712 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 SCP2D1Q9UJQ7 156 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 TMEM5Q9Y2B1 443 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 INSL6Q9Y581 213 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 CKAP5Q14008 2032 aa15.16■□□□□ 0.02
SHMT2-232ENST00000557487 RANBP2P49792 3224 aaKnown RBP15.16■□□□□ 0.02
SHMT2-232ENST00000557487 A0A0G2JN53 185 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 LRRN3E7EW58 273 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 BHLHE40O14503 412 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 FRS3O43559 492 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 TSC22D2O75157 780 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SULT1A3P0DMM9 295 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SULT1A4P0DMN0 295 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 ADH5P11766 374 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 NRG3P56975 720 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 ERVK-21P61565 698 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 POU4F2Q12837 409 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 UAP1L1Q3KQV9 507 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 PUS10Q3MIT2 529 aaKnown RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 CEACAM19Q7Z692 300 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 OR2A1Q8NGT9 310 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 OR56B4Q8NH76 319 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 FANK1Q8TC84 345 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SP7Q8TDD2 431 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 TMEM255BQ8WV15 326 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 MAP6Q96JE9 813 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 HS6ST2Q96MM7 605 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 ZNF681Q96N22 645 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 TMEM168Q9H0V1 697 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 LRRN3Q9H3W5 708 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 EVA1AQ9H8M9 152 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 HEXA-AS1Q9H8Q6 139 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 CMC2Q9NRP2 79 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 HAO2Q9NYQ3 351 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 BAIAP2Q9UQB8 552 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SIRT4Q9Y6E7 314 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 PTPRSQ13332 1948 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 IGKV1-8A0A0C4DH67 115 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 A0A1B0GTQ1 180 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 TRAPPC13A5PLN9 417 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SLC9B1P1A6NJY1 282 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 GLOD5A6NK44 160 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 HYAL3O43820 417 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SLC2A10O95528 541 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 ADH1CP00326 375 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 THY1P04216 161 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 WEE1P30291 646 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 BCL6P41182 706 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 MC3RP41968 323 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 CDK3Q00526 305 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 GPR139Q6DWJ6 353 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 ARL9Q6T311 187 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 NRROSQ86YC3 692 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 LRRC20Q8TCA0 184 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 HAVCR2Q8TDQ0 301 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 KLK6Q92876 244 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 YIPF5Q969M3 257 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 GIMAP5Q96F15 307 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 MS4A4EQ96PG1 132 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 FERD3LQ96RJ6 166 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 CACNG6Q9BXT2 260 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 HDAC8Q9BY41 377 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 ZCCHC4Q9H5U6 513 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 MRPS30Q9NP92 439 aaKnown RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 AKAP7Q9P0M2 348 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SLC7A7Q9UM01 511 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 CAMK2AQ9UQM7 478 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 SPEF1Q9Y4P9 236 aa15.15■□□□□ 0.02
SHMT2-232ENST00000557487 PCYT1BQ9Y5K3 369 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-232ENST00000557487 TRAV6A0A075B6T7 132 aa15.14■□□□□ 0.01
SHMT2-232ENST00000557487 PRR23D1E9PI22 279 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-232ENST00000557487 FMO6PO60774 539 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms