RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TERF1P54274 439 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 FOXG1P55316 489 aaPredicted RBP8.11□□□□□ -1.11
NEDD1-211ENST00000557454 SARNPP82979 210 aaKnown RBP8.11□□□□□ -1.11
NEDD1-211ENST00000557454 IRF8Q02556 426 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 CHIT1Q13231 466 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 LAPTM5Q13571 262 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 HLXQ14774 488 aaPredicted RBP8.11□□□□□ -1.11
NEDD1-211ENST00000557454 GABRA6Q16445 453 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 PDK4Q16654 411 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 KCTD19Q17RG1 926 aaPredicted RBP8.11□□□□□ -1.11
NEDD1-211ENST00000557454 C2orf68Q2NKX9 166 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 HSP90AA5PQ58FG0 334 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 ELFN2Q5R3F8 820 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 C16orf87Q6PH81 154 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 FRA10AC1Q70Z53 315 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 UBE2J2Q8N2K1 259 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 NOA1Q8NC60 698 aaKnown RBP8.11□□□□□ -1.11
NEDD1-211ENST00000557454 OR7G3Q8NG95 312 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 CALML6Q8TD86 181 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 SLC9A6Q92581 669 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 ESAMQ96AP7 390 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 VSTM2LQ96N03 204 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 DNAJC7Q99615 494 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 GPA33Q99795 319 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 KCNF1Q9H3M0 494 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF665Q9H7R5 613 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 TIGARQ9NQ88 270 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 GAR1Q9NY12 217 aaKnown RBP8.11□□□□□ -1.11
NEDD1-211ENST00000557454 KLHL9Q9P2J3 617 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 TSC22D4Q9Y3Q8 395 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 IGLV3-32A0A0A0MS00 114 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 CLPSL1A2RUU4 121 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 TAPBPO15533 448 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 RGS14O43566 566 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 SEC14L2O76054 403 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 NGFP01138 241 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 ATP1B1P05026 303 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 ANPEPP15144 967 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 HSPA7P48741 367 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 MANFP55145 182 aaKnown RBP8.1□□□□□ -1.11
NEDD1-211ENST00000557454 GPX6P59796 221 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 PRR20EP86478 221 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 PRR20CP86479 221 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 PRR20DP86480 221 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 PRR20BP86481 221 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 PRR20AP86496 221 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 CSTF3Q12996 717 aaKnown RBP8.1□□□□□ -1.11
NEDD1-211ENST00000557454 SNX1Q13596 522 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF362Q5T0B9 420 aaPredicted RBP8.1□□□□□ -1.11
NEDD1-211ENST00000557454 FBXW9Q5XUX1 488 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 MED27Q6P2C8 311 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 SLC44A2Q8IWA5 706 aaPredicted RBP8.1□□□□□ -1.11
NEDD1-211ENST00000557454 LMNTD2Q8IXW0 634 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 LAS2Q8IYD9 372 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 LILRA2Q8N149 483 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 SLC43A2Q8N370 569 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 CDYL2Q8N8U2 506 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 SLC16A11Q8NCK7 471 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 C2CD4AQ8NCU7 369 aaPredicted RBP8.1□□□□□ -1.11
NEDD1-211ENST00000557454 HUS1BQ8NHY5 278 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 POC1BQ8TC44 478 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 FAM167BQ9BTA0 163 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 DDX31Q9H8H2 851 aaKnown RBP8.1□□□□□ -1.11
NEDD1-211ENST00000557454 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 TCF7L1Q9HCS4 588 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 NECAP2Q9NVZ3 263 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 FAM120CQ9NX05 1096 aaKnown RBP8.1□□□□□ -1.11
NEDD1-211ENST00000557454 TAS2R16Q9NYV7 291 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 OR10H1Q9Y4A9 318 aa8.1□□□□□ -1.11
NEDD1-211ENST00000557454 A0A087WZY1 265 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 A0A1W2PRB8 838 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 FAM181BA6NEQ2 426 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 CCDC188H7C350 402 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 PHGDHO43175 533 aaKnown RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 PPIHO43447 177 aaKnown RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 ERAL1O75616 437 aaKnown RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 ITGA5P08648 1049 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 ADRA2AP08913 450 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 CCDC175P0C221 793 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 CTAGE8P0CG41 777 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 COL8A2P25067 703 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 SERPINB1P30740 379 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 NAP1L1P55209 391 aaKnown RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 TSNQ15631 228 aaKnown RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 TBCCQ15814 346 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 PLPPR5Q32ZL2 321 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 ARMCX4Q5H9R4 360 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 CPTPQ5TA50 214 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 C9orf135Q5VTT2 229 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 OR7E24Q6IFN5 339 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 FAM180BQ6P0A1 224 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 SPATA21Q7Z572 469 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 CTAGE4Q8IX94 777 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 CDK20Q8IZL9 346 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 RIBC1Q8N443 379 aaPredicted RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 C1orf54Q8WWF1 131 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF75CPQ92670 426 aaPredicted RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 UBE2E3Q969T4 207 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 PDLIM5Q96HC4 596 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms