RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 DOPEY1Q5JWR5 2465 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 KIAA1549Q9HCM3 1950 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 A0A1W2PP18 115 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 C7orf72A4D263 438 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 H3BML4 177 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 CLIC1O00299 241 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 UGT2B17O75795 530 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 H6PDO95479 791 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 NUDT14O95848 222 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 IL2RAP01589 272 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 NR2F1P10589 423 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 UBL4AP11441 157 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 PPIBP23284 216 aaKnown RBP11.29□□□□□ -0.6
SLIRP-209ENST00000557342 CRATP43155 626 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 ARFIP2P53365 341 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 CLDN18P56856 261 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 DSTNP60981 165 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 FUT5Q11128 374 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 FADDQ13158 208 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 GNA13Q14344 377 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 FGFBP1Q14512 234 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 TMEM44Q2T9K0 475 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 PLPPR5Q32ZL2 321 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 COX20Q5RI15 118 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 LRIF1Q5T3J3 769 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 ARSKQ6UWY0 536 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 EIF3MQ7L2H7 374 aaKnown RBP11.29□□□□□ -0.6
SLIRP-209ENST00000557342 GTPBP8Q8N3Z3 284 aaPredicted RBP11.29□□□□□ -0.6
SLIRP-209ENST00000557342 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 TSPEARQ8WU66 669 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 UCN2Q96RP3 112 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 TUBA1CQ9BQE3 449 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 LAT2Q9GZY6 243 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.29□□□□□ -0.6
SLIRP-209ENST00000557342 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 MED17Q9NVC6 651 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 Q9UFV3 132 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 ICAM5Q9UMF0 924 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 SLC35A3Q9Y2D2 325 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 CARD8Q9Y2G2 431 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 ZNF337Q9Y3M9 751 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
SLIRP-209ENST00000557342 FLNBO75369 2602 aaKnown RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 PRAMEF27A3QJZ7 478 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 MBD3L4A6NDZ8 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 MBD3L3A6NE82 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CLCA1A8K7I4 914 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 TNFRSF21O75509 655 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CSTAP01040 98 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 C1QCP02747 245 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CAPN3P20807 821 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 ADH6P28332 368 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CEACAM8P31997 349 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 MVDP53602 400 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 RPS3AP61247 264 aaKnown RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CHRNEQ04844 493 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CBFBQ13951 182 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 SYPL1Q16563 259 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 GTDC1Q4AE62 458 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 SP5Q6BEB4 398 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 SEM1Q6ZVN7 128 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 MED12LQ86YW9 2145 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CCDC71Q8IV32 467 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 ANKFN1Q8N957 763 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 OR5M1Q8NGP8 315 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 OR5W2Q8NH69 310 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 ARSGQ96EG1 525 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 ZFP3Q96NJ6 502 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 TM9SF2Q99805 663 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 ZNF385DQ9H6B1 395 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 MTHFD2LQ9H903 347 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 KCNJ16Q9NPI9 418 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 SLC52A3Q9NQ40 469 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 KCNE5Q9UJ90 142 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 LEF1Q9UJU2 399 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 CORO2BQ9UQ03 480 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 NDUFAF1Q9Y375 327 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 L3MBTL1Q9Y468 752 aa11.28□□□□□ -0.6
SLIRP-209ENST00000557342 GPC6Q9Y625 555 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-209ENST00000557342 SPTBN1Q01082 2364 aaKnown RBP11.27□□□□□ -0.6
SLIRP-209ENST00000557342 PTPN13Q12923 2485 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 DVL2O14641 736 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 ANGPT2O15123 496 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 CHRM4P08173 479 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 LINGO3P0C6S8 592 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 ETFAP13804 333 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 HOXB9P17482 250 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-209ENST00000557342 ME2P23368 584 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 ELK4P28324 431 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 RNF144AP50876 292 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-209ENST00000557342 CRISP3P54108 245 aa11.27□□□□□ -0.61
SLIRP-209ENST00000557342 RAC1P63000 192 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms