RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 FURINP09958 794 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 CRABP1P29762 137 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 KCNJ10P78508 379 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 PRSS36Q5K4E3 855 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 CLEC14AQ86T13 490 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 AKAP14Q86UN6 197 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 WSB2Q9NYS7 404 aaPredicted RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 SLAMF8Q9P0V8 285 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 MRPS2Q9Y399 296 aaKnown RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 LRRC37AA6NMS7 1700 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 GLB1P16278 677 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 CPOXP36551 454 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 GLP1RP43220 463 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 SRSF5Q13243 272 aaKnown RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 VEZF1Q14119 521 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 METTL25Q8N6Q8 603 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 HDAC2Q92769 488 aaKnown RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 LRRC61Q9BV99 259 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 C20orf27Q9GZN8 174 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 METTL8Q9H825 291 aaKnown RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 NUFIP1Q9UHK0 495 aaKnown RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 MICAL3Q7RTP6 2002 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 CLDN25C9JDP6 229 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 OR2T1O43869 369 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 CEACAM5P06731 702 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 NUDT7P0C024 238 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 HERV-K104P61576 105 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 LSMEM2Q8N112 164 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 C1QTNF2Q9BXJ5 285 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 NRSN2Q9GZP1 204 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 IL32P24001 234 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 TMEM92Q6UXU6 159 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 TCEAL2Q9H3H9 227 aaPredicted RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 SERGEFQ9UGK8 458 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 C4orf47A7E2U8 309 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 H3BSA7 217 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 UBFD1O14562 309 aaKnown RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 HCRTR1O43613 425 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 GALR3O60755 368 aaPredicted RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 RETP07949 1114 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ST6GAL1P15907 406 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ITIH1P19827 911 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 MS4A2Q01362 244 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 TMPRSS12Q86WS5 348 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 LRRC18Q8N456 261 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 NPRL2Q8WTW4 380 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 MFRPQ9BY79 579 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 LOC105369274A0A096LPK9 316 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 LOC102723532A0A0G2JNH3 316 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 AHCYL1O43865 530 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF35P13682 527 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 PSMD7P51665 324 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 GFERP55789 205 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 SIRPAP78324 504 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ATAD3CQ5T2N8 411 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 SYCE2Q6PIF2 218 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 SFTPA1Q8IWL2 248 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 OR4N4Q8N0Y3 316 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 TMEM178AQ8NBL3 297 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 DNAAF1Q8NEP3 725 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ADAMTS16Q8TE57 1224 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 THRSPQ92748 146 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF300Q96RE9 604 aaPredicted RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 A0A0X1KG70 313 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 APOC1P02654 83 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 MPLP40238 635 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 DEFB109BQ30KR1 87 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 XKR5Q6UX68 686 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 TEX19Q8NA77 164 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 DCAF13Q9NV06 445 aaKnown RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 TMEM45AQ9NWC5 275 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 MED11Q9P086 117 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 C14orf166Q9Y224 244 aaKnown RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 CTNSO60931 367 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 COL9A1P20849 921 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 RAB15P59190 212 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 NEIL3Q8TAT5 605 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF597Q96LX8 424 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 GLIPR2Q9H4G4 154 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 FSCN3Q9NQT6 498 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 LRIT2A6NDA9 550 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 MTNR1AP48039 350 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 PRKXP51817 358 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 EXT1Q16394 746 aa16.19■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF791Q3KP31 576 aaPredicted RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 THOC7Q6I9Y2 204 aaKnown RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 MRPL21Q7Z2W9 205 aaKnown RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 FAM71F1Q96KD3 344 aaPredicted RBP16.19■□□□□ 0.18
PTPN21-208ENST00000556564 CCRL2O00421 344 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 RGS9O75916 674 aaPredicted RBP16.18■□□□□ 0.18
PTPN21-208ENST00000556564 POU3F1Q03052 451 aaPredicted RBP16.18■□□□□ 0.18
PTPN21-208ENST00000556564 BLMHQ13867 455 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 NDUFA5Q16718 116 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 VWA2Q5GFL6 755 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 CD300LGQ6UXG3 332 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 TRAPPC6BQ86SZ2 158 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 MARCH3Q86UD3 253 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 ACBD7Q8N6N7 88 aa16.18■□□□□ 0.18
PTPN21-208ENST00000556564 PRAMEF17Q5VTA0 474 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms