RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SEMG1P04279 462 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 H1F0P07305 194 aaKnown RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 UBTFL6P0CB48 400 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 CNR1P21554 472 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 RRM2P31350 389 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 DNAJA1P31689 397 aaKnown RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 IFNGR2P38484 337 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 MASP1P48740 699 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 P2RX1P51575 399 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 CCR4P51679 360 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 SPIBQ01892 262 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 SRSF6Q13247 344 aaKnown RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 TUBA3CQ13748 450 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 GLIPR1L2Q4G1C9 344 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 TUBA3EQ6PEY2 450 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF613Q6PF04 617 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 LINC00696Q6ZRV3 163 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 HIPK1Q86Z02 1210 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 SVOPLQ8N434 492 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 FAM86B1Q8N7N1 296 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 GATSQ8NAP1 163 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 OR4K17Q8NGC6 315 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 GRHL3Q8TE85 626 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 PHF10Q8WUB8 498 aaKnown RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 DNAJA4Q8WW22 397 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 TMEM234Q8WY98 164 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 LRTOMTQ8WZ04 291 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 CNOT9Q92600 299 aaKnown RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 HAS2Q92819 552 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 NRBF2Q96F24 287 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 C7orf34Q96L11 122 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 PRRC1Q96M27 445 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 C5orf34Q96MH7 638 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 C9orf16Q9BUW7 83 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 OSBPL10Q9BXB5 764 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 ANGPTL4Q9BY76 406 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 AMBRA1Q9C0C7 1298 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 KRCC1Q9NPI7 259 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 RLIMQ9NVW2 624 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 DNAJB12Q9NXW2 375 aaKnown RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 NDUFAF4Q9P032 175 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 KCNE5Q9UJ90 142 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 CARD8Q9Y2G2 431 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 KLF13Q9Y2Y9 288 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-218ENST00000556343 PCDHGB6Q9Y5F9 930 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 WIF1Q9Y5W5 379 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
ACTN1-218ENST00000556343 TRAPPC13A5PLN9 417 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 OR5H15A6NDH6 313 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 CLDN24A6NM45 220 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 TMEM229AB2RXF0 380 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 MKRN2OSH3BPM6 223 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 KLRC4-KLRK1H3BQV0 150 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 K7ENP7 123 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 TNFRSF11BO00300 401 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 FAAHO00519 579 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF354AO60765 605 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 GADD45GO95257 159 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 GKN3PP0CG01 181 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 GP1BBP13224 206 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 WT1P19544 449 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 TNFRSF1BP20333 461 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 ELAVL4P26378 380 aaKnown RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 CD96P40200 585 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 HTR3AP46098 478 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 VLDLRP98155 873 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 TLE3Q04726 772 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 EPS8Q12929 822 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 SKP2Q13309 424 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 OR1Q1Q15612 314 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 OR1C1Q15619 314 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 TRIP10Q15642 601 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 COLEC12Q5KU26 742 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 ENTPD8Q5MY95 495 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 FNDC7Q5VTL7 733 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 WBP2NLQ6ICG8 309 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 BORAQ6PGQ7 559 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 INO80CQ6PI98 192 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 UNQ6494/PRO21346Q6UXR6 183 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 ZDHHC13Q8IUH4 622 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 ZADH2Q8N4Q0 377 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 FAM98AQ8NCA5 519 aaKnown RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 PSD4Q8NDX1 1056 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 OR6T1Q8NGN1 323 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 OR1J4Q8NGS1 313 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 OR5W2Q8NH69 310 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 OR5K1Q8NHB7 308 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 RNF217Q8TC41 542 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 RNF138Q8WVD3 245 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 SLC38A4Q969I6 547 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 EME1Q96AY2 570 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 TMEM41AQ96HV5 264 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 HS6ST2Q96MM7 605 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 EPYCQ99645 322 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 PKP2Q99959 881 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 ANKRD19PQ9H560 264 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 ZNF552Q9H707 407 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-218ENST00000556343 AGPAT4Q9NRZ5 378 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 FLRT3Q9NZU0 649 aa8.43□□□□□ -1.06
ACTN1-218ENST00000556343 RIMS3Q9UJD0 308 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms