RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 AGR3Q8TD06 166 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ACTRT2Q8TDY3 377 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 TWIST2Q8WVJ9 160 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 OSTF1Q92882 214 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 ZBTB8AQ96BR9 441 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 PLPPR2Q96GM1 343 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 SRXN1Q9BYN0 137 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 UBQLN4Q9NRR5 601 aa11.86□□□□□ -0.51
TGFB3-204ENST00000556285 MCTS1Q9ULC4 181 aaKnown RBP11.86□□□□□ -0.51
TGFB3-204ENST00000556285 UQCRHLA0A096LP55 91 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 SCDO00767 359 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 NEFHP12036 1026 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 AGTR1P30556 359 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 SFTPDP35247 375 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 POU6F2P78424 691 aaPredicted RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 KRTAP1-1Q07627 177 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 CAPRIN1Q14444 709 aaKnown RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 LASP1Q14847 261 aaKnown RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 TOMM34Q15785 309 aaPredicted RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 ARL13AQ5H913 290 aaPredicted RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 BEX5Q5H9J7 111 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 LRIG3Q6UXM1 1119 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 ZNF704Q6ZNC4 412 aaPredicted RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 RNF165Q6ZSG1 346 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 ESPNLQ6ZVH7 1005 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 PLEKHM3Q6ZWE6 761 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 NUFIP2Q7Z417 695 aaKnown RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 LILRA2Q8N149 483 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 ABHD3Q8WU67 409 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 CAVIN3Q969G5 261 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 CHMP6Q96FZ7 201 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 C3orf30Q96M34 536 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 KLHL15Q96M94 604 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 BTBD2Q9BX70 525 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 ACTR6Q9GZN1 396 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 CXorf36Q9H7Y0 433 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 ZCCHC3Q9NUD5 404 aaKnown RBP11.85□□□□□ -0.51
TGFB3-204ENST00000556285 SLC17A7Q9P2U7 560 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 TRAF6Q9Y4K3 522 aa11.85□□□□□ -0.51
TGFB3-204ENST00000556285 A0A1W2PQD3 144 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 TLDC2A0PJX2 215 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 KIF2AO00139 706 aaPredicted RBP11.84□□□□□ -0.51
TGFB3-204ENST00000556285 SCAMP2O15127 329 aaKnown RBP11.84□□□□□ -0.51
TGFB3-204ENST00000556285 PEX11AO75192 247 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 CHEK2O96017 543 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 FGF4P08620 206 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 HPGDP15428 266 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 CARD18P57730 90 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 PTGR1Q14914 329 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 KLHL26Q53HC5 615 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 ZCCHC12Q6PEW1 402 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 ZCCHC23Q6ZST2 131 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 ATG4DQ86TL0 474 aaPredicted RBP11.84□□□□□ -0.51
TGFB3-204ENST00000556285 TRABD2AQ86V40 505 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 KRTCAP2Q8N6L1 136 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 ATP6V1C2Q8NEY4 427 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 RAB3IL1Q8TBN0 382 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 PHOSPHO1Q8TCT1 267 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 TMEM204Q9BSN7 226 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 TRMOQ9BU70 441 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 BDH2Q9BUT1 245 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 C1orf50Q9BV19 199 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 PIGUQ9H490 435 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 ANKZF1Q9H8Y5 726 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 CARD8Q9Y2G2 431 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 TMED5Q9Y3A6 229 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 SNX8Q9Y5X2 465 aa11.84□□□□□ -0.51
TGFB3-204ENST00000556285 SPAG7O75391 227 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 GCM2O75603 506 aaPredicted RBP11.83□□□□□ -0.52
TGFB3-204ENST00000556285 SLU7O95391 586 aaKnown RBP11.83□□□□□ -0.52
TGFB3-204ENST00000556285 CNOT4O95628 575 aaKnown RBP11.83□□□□□ -0.52
TGFB3-204ENST00000556285 C6orf47O95873 294 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 PPP3CBP16298 524 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 ME2P23368 584 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 LCN1P31025 176 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 ASMTP46597 345 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 SERPINB4P48594 390 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 NR1H2P55055 460 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 MLC1Q15049 377 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 ZNF239Q16600 458 aaKnown RBP11.83□□□□□ -0.52
TGFB3-204ENST00000556285 XKR7Q5GH72 579 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 CDC73Q6P1J9 531 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 BEND4Q6ZU67 534 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 OLIG3Q7RTU3 272 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 R3HCC1LQ7Z5L2 792 aaKnown RBP11.83□□□□□ -0.52
TGFB3-204ENST00000556285 LSRQ86X29 649 aaPredicted RBP11.83□□□□□ -0.52
TGFB3-204ENST00000556285 MISPQ8IVT2 679 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 TUSC5Q8IXB3 177 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 ZNF619Q8N2I2 560 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 BANPQ8N9N5 519 aa11.83□□□□□ -0.52
TGFB3-204ENST00000556285 LILRB1Q8NHL6 650 aaPredicted RBP11.83□□□□□ -0.52
TGFB3-204ENST00000556285 RNF128Q8TEB7 428 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms