RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 TMEM44Q2T9K0 475 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 PGGHGQ32M88 737 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 ZMAT1Q5H9K5 638 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 FAM220AQ7Z4H9 259 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 LUZP2Q86TE4 346 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 ASCC1Q8N9N2 400 aaKnown RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 TP53I13Q8NBR0 393 aaPredicted RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 RSC1A1Q92681 617 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 HS6ST2Q96MM7 605 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 ALG8Q9BVK2 526 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 SLC38A1Q9H2H9 487 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 BRD7Q9NPI1 651 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 FGF17O60258 216 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 HPGDSO60760 199 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 KCNJ13O60928 360 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 MT-ND5P03915 603 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 ACP2P11117 423 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 APEX1P27695 318 aaKnown RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 SOX18P35713 384 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 TGFBR2P37173 567 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 IFITM3Q01628 133 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 RAB40BQ12829 278 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 MLLT11Q13015 90 aaPredicted RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 SRSF5Q13243 272 aaKnown RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 RUNX2Q13950 521 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 RAB30Q15771 203 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 CCDC28AQ8IWP9 274 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 LRRC56Q8IYG6 542 aaPredicted RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 ZDHHC1Q8WTX9 485 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 EFHD2Q96C19 240 aaPredicted RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 MRPL48Q96GC5 212 aaKnown RBP13.84□□□□□ -0.19
NEK9-209ENST00000556170 OSGIN1Q9UJX0 560 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 ERVK-19Q9WJR5 959 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 ASB4Q9Y574 426 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 UNC13CQ8NB66 2214 aa13.84□□□□□ -0.19
NEK9-209ENST00000556170 TRAV6A0A075B6T7 132 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 GXYLT2A0PJZ3 443 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 CDC14CA4D256 554 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 SLC1A3P43003 542 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 TP53I3Q53FA7 332 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 CNIH2Q6PI25 160 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 PFN4Q8NHR9 129 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 HSPA12BQ96MM6 686 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 CPNE5Q9HCH3 593 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 HHATLQ9HCP6 504 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 CA14Q9ULX7 337 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 DAPP1Q9UN19 280 aa13.83□□□□□ -0.19
NEK9-209ENST00000556170 THSD7BQ9C0I4 1608 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 CTSVO60911 334 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 RNH1P13489 461 aaKnown RBP13.83□□□□□ -0.2
NEK9-209ENST00000556170 HK1P19367 917 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 COL9A1P20849 921 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 TSEN54Q7Z6J9 526 aaKnown RBP13.83□□□□□ -0.2
NEK9-209ENST00000556170 FRMD6Q96NE9 622 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 CHST8Q9H2A9 424 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 NOX1Q9Y5S8 564 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 CDH10Q9Y6N8 788 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 ANKRD34BA5PLL1 514 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 TMEM150CB9EJG8 249 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 MAGEB4O15481 346 aaPredicted RBP13.83□□□□□ -0.2
NEK9-209ENST00000556170 TEAD1P28347 426 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 SMUG1Q53HV7 270 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 SHISA6Q6ZSJ9 500 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 ZNF619Q8N2I2 560 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 SFXN5Q8TD22 340 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 NEURL2Q9BR09 285 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 TMEM246Q9BRR3 403 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 CDCA4Q9BXL8 241 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 FBXO8Q9NRD0 319 aa13.83□□□□□ -0.2
NEK9-209ENST00000556170 SIDT1Q9NXL6 827 aaKnown RBP13.83□□□□□ -0.2
NEK9-209ENST00000556170 NUFIP1Q9UHK0 495 aaKnown RBP13.83□□□□□ -0.2
NEK9-209ENST00000556170 C11orf98E9PRG8 122 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 SSNA1O43805 119 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 IL7P13232 177 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 C21orf58P58505 322 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 AGERQ15109 404 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 ANGPT1Q15389 498 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 CNOT9Q92600 299 aaKnown RBP13.82□□□□□ -0.2
NEK9-209ENST00000556170 SLITRK2Q9H156 845 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 SPATA2Q9UM82 520 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 ZDBF2Q9HCK1 2354 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 TRIM64A6NGJ6 449 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 PTTG1O95997 202 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 CHRNB1P11230 501 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 SLC6A6P31641 620 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 TRHRP34981 398 aaPredicted RBP13.82□□□□□ -0.2
NEK9-209ENST00000556170 SNRPGP62308 76 aaKnown RBP13.82□□□□□ -0.2
NEK9-209ENST00000556170 DEFB133Q30KQ1 61 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 SYCE2Q6PIF2 218 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 TMEM64Q6YI46 380 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 TNFRSF13CQ96RJ3 184 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 SDF2Q99470 211 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 UBQLN3Q9H347 655 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 FBXO34Q9NWN3 711 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 MRPS2Q9Y399 296 aaKnown RBP13.82□□□□□ -0.2
NEK9-209ENST00000556170 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 UGT2B10P36537 528 aa13.82□□□□□ -0.2
NEK9-209ENST00000556170 GBX2P52951 348 aaPredicted RBP13.82□□□□□ -0.2
NEK9-209ENST00000556170 INSL4Q14641 139 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms