RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 RPS4XP62701 263 aaKnown RBP12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 FOXF1Q12946 379 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RFTN2Q52LD8 501 aaPredicted RBP12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SFRP5Q5T4F7 317 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LILRA2Q8N149 483 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MS4A4EQ96PG1 132 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TRIM2Q9C040 744 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SLCO5A1Q9H2Y9 848 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 UBQLN4Q9NRR5 601 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 KLHL13Q9P2N7 655 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ICAM5Q9UMF0 924 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RNF115Q9Y4L5 304 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ESPNB1AK53 854 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NPIPB9F8W1W9 429 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 AKAP10O43572 662 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SYNGR4O95473 234 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 UROSP10746 265 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ADH6P28332 368 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RNF144AP50876 292 aaPredicted RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CARD18P57730 90 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 BSPH1Q075Z2 132 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZNF672Q499Z4 452 aaPredicted RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 KLHL26Q53HC5 615 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RNF165Q6ZSG1 346 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZNF619Q8N2I2 560 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 STEAP2Q8NFT2 490 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 KBTBD8Q8NFY9 601 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CEP70Q8NHQ1 597 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CLHC1Q8NHS4 586 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 B4GALNT2Q8NHY0 566 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PIWIL2Q8TC59 973 aaKnown RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SMAP2Q8WU79 429 aaPredicted RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 FAM120BQ96EK7 910 aaKnown RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 C16orf45Q96MC5 204 aaPredicted RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TSSK3Q96PN8 268 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CCT7Q99832 543 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CXorf36Q9H7Y0 433 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LRTM1Q9HBL6 345 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RRAGDQ9NQL2 400 aaPredicted RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ACSS1Q9NUB1 689 aaPredicted RBP12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 OXSMQ9NWU1 459 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 C1orf109Q9NX04 203 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 STOML1Q9UBI4 398 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TBK1Q9UHD2 729 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DCDC2Q9UHG0 476 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 KCNE3Q9Y6H6 103 aa12.74□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NPIPA5A0A0B4J1W7 369 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NPIPA7E9PJI5 369 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LSM1O15116 133 aaKnown RBP12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RAMP1O60894 148 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NPIPA8P0DM63 369 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MYL2P10916 166 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ENPP1P22413 925 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ELK4P28324 431 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LCN1P31025 176 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZNF41P51814 821 aaPredicted RBP12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 VEZF1Q14119 521 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NDUFAF6Q330K2 333 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 VPS26BQ4G0F5 336 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ALKBH2Q6NS38 261 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 STK32CQ86UX6 486 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PHC2Q8IXK0 858 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CEP112Q8N8E3 955 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 FBXO27Q8NI29 283 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GPR119Q8TDV5 335 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZNF75CPQ92670 426 aaPredicted RBP12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 FBXW5Q969U6 566 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CCDC126Q96EE4 140 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZBED6CLQ96FA7 236 aaPredicted RBP12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ANKZF1Q9H8Y5 726 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NPAP1Q9NZP6 1156 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PSMC3IPQ9P2W1 217 aaPredicted RBP12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GDF2Q9UK05 429 aaPredicted RBP12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ACTL7BQ9Y614 415 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
CHMP4BP1-201ENST00000556017 IGHV3-15A0A0B4J1V0 119 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SHISA9B4DS77 424 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 H3BQF6 201 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ETV2O00321 342 aaPredicted RBP12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZNF195O14628 629 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CLOCKO15516 846 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CD5LO43866 347 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ADAP00813 363 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 HMGN2P05204 90 aaKnown RBP12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PRKCAP17252 672 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GPC1P35052 558 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DMTNQ08495 405 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MLC1Q15049 377 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ETFDHQ16134 617 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 UGT3A2Q3SY77 523 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZCCHC12Q6PEW1 402 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 FCRLAQ7L513 359 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LSRQ86X29 649 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms