RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CATSPER1Q8NEC5 780 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 DNAJB12Q9NXW2 375 aaKnown RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 STMN3Q9NZ72 180 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 SERINC4A6NH21 518 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 CPSF4LA6NMK7 179 aaKnown RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 AP3D1O14617 1153 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 FADS1O60427 444 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 PRSS23O95084 383 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 WDPCPO95876 746 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 ICAM2P13598 275 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 HTR2AP28223 471 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 EVI2BP34910 448 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 CD96P40200 585 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 CDH12P55289 794 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 RGS8P57771 180 aaPredicted RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 KCNC4Q03721 635 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 KCNAB2Q13303 367 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 CRTC2Q53ET0 693 aaPredicted RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 PRAMEF20Q5VT98 475 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 RNF220Q5VTB9 566 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 FNDC7Q5VTL7 733 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 OR2T5Q6IEZ7 315 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 PACS2Q86VP3 889 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 POGLUT1Q8NBL1 392 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 OR2T29Q8NH02 315 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 EXTL1Q92935 676 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 SPACA9Q96E40 222 aaPredicted RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 CENPNQ96H22 339 aaPredicted RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 SH3YL1Q96HL8 342 aaPredicted RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 IP6K3Q96PC2 410 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 UBQLN4Q9NRR5 601 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 SLC13A4Q9UKG4 626 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 A4GNTQ9UNA3 340 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 ZNF232Q9UNY5 417 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 YARS2Q9Y2Z4 477 aaKnown RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 CHCHD2Q9Y6H1 151 aaPredicted RBP9.85□□□□□ -0.83
TDP1-211ENST00000555178 ENPP4Q9Y6X5 453 aa9.85□□□□□ -0.83
TDP1-211ENST00000555178 OR6C70A6NIJ9 312 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SYT5O00445 386 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SCDO00767 359 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SOCS2O14508 198 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 GNGT2O14610 69 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 DEAF1O75398 565 aaPredicted RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 THY1P04216 161 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 GUSBP08236 651 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 FCGR1AP12314 374 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 HPGDP15428 266 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 ZNF23P17027 643 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 TBXA2RP21731 343 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 RYKP34925 604 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SSR4P51571 173 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 PNLIPRP2P54317 469 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 PSMD4P55036 377 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 LSM11P83369 360 aaKnown RBP eCLIP9.84□□□□□ -0.83
TDP1-211ENST00000555178 SPIBQ01892 262 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 COLEC12Q5KU26 742 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 OGFRL1Q5TC84 451 aaPredicted RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 PIWIL3Q7Z3Z3 882 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 ZNF605Q86T29 641 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 PHOSPHO1Q8TCT1 267 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 PHF10Q8WUB8 498 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 NPAS1Q99742 590 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SLC29A1Q99808 456 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 CACYBPQ9HB71 228 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 STOML1Q9UBI4 398 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 DNAJB9Q9UBS3 223 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 MRTO4Q9UKD2 239 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 SLC9A8Q9Y2E8 581 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 CARD8Q9Y2G2 431 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 DTNAQ9Y4J8 743 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 TLN1Q9Y490 2541 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 A0A087WV48 116 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 PINLYPA6NC86 204 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 CASQ2O14958 399 aaPredicted RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 RRP8O43159 456 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 NEURL1O76050 574 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 CSTAP01040 98 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 PRKACGP22612 351 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 GAS1P54826 345 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SOX8P57073 446 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 CXADRP78310 365 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 TUBA3CQ13748 450 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 NTRK2Q16620 822 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 TUBA3EQ6PEY2 450 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SLC5A8Q8N695 610 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SLC22A8Q8TCC7 542 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 ASB15Q8WXK1 588 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 YY1AP1Q9H869 796 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SH2D2AQ9NP31 389 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 DEPPQ9NTK1 212 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 SAMHD1Q9Y3Z3 626 aaKnown RBP9.84□□□□□ -0.83
TDP1-211ENST00000555178 LYVE1Q9Y5Y7 322 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 ZNF407Q9C0G0 2248 aa9.84□□□□□ -0.83
TDP1-211ENST00000555178 HS6ST1O60243 411 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 E2F6O75461 281 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 GPR85P60893 370 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 FOXK1P85037 733 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 ZNF117Q03924 483 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 TBR1Q16650 682 aa9.83□□□□□ -0.84
TDP1-211ENST00000555178 MEP1AQ16819 746 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms