RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 B4GALT5O43286 388 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF749O43361 778 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CYTH3O43739 400 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 BCAS2O75934 225 aaPredicted RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ANXA9O76027 345 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 B3GAT3O94766 335 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RHOBTB1O94844 696 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CCNE2O96020 404 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 FHP07954 510 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SERPINF2P08697 491 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 PCP11498 1178 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CSRP1P21291 193 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF10P21506 573 aaPredicted RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 UQCRFS1P47985 274 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CSRP3P50461 194 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 HNRNPFP52597 415 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RIDAP52758 137 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CRYBB1P53674 252 aaPredicted RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CASP9P55211 416 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 NDUFV3P56181 108 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 PEX3P56589 373 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SRP54P61011 504 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RPL27P61353 136 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RPS27AP62979 156 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SRPXP78539 464 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CCZ1BP86790 482 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CCZ1P86791 482 aaPredicted RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CDKL1Q00532 357 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 MS4A2Q01362 244 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 PRKCEQ02156 737 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF33AQ06730 810 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ITGB3BPQ13352 177 aaPredicted RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 PLD1Q13393 1074 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 MSLNQ13421 630 aaPredicted RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RAPSNQ13702 412 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SLC17A1Q14916 467 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 P2RY14Q15391 338 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SBK1Q52WX2 424 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TEX35Q5T0J7 233 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 PRAMEF7Q5VXH5 474 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 HIST2H2AA3Q6FI13 130 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RTL6Q6ICC9 239 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RAB12Q6IQ22 244 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ZSCAN25Q6NSZ9 544 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 DLEU7Q6UYE1 221 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 STOX1Q6ZVD7 989 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CARM1Q86X55 608 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RNF130Q86XS8 419 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 WDR49Q8IV35 697 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 PARP8Q8N3A8 854 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ALLCQ8N6M5 410 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 GVQW1Q8N7I0 195 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 BANPQ8N9N5 519 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CCNYQ8ND76 341 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TMEM185AQ8NFB2 350 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 EXOC6Q8TAG9 804 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SSC4DQ8WTU2 575 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CHPT1Q8WUD6 406 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 PDCD6IPQ8WUM4 868 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ESAMQ96AP7 390 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RAB39BQ96DA2 213 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CDHR1Q96JP9 859 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RUNDC3BQ96NL0 473 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RUFY1Q96T51 708 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ATF6BQ99941 703 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 RBM4BQ9BQ04 359 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CHCHD5Q9BSY4 110 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 FUNDC2Q9BWH2 189 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 DDX47Q9H0S4 455 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ABCG8Q9H221 673 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CXXC4Q9H2H0 198 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TUBB1Q9H4B7 451 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SYNDIG1Q9H7V2 258 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 MOB1AQ9H8S9 216 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 DEPPQ9NTK1 212 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 TECRQ9NZ01 308 aaKnown RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 THYN1Q9P016 225 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 NDUFA13Q9P0J0 144 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 VPS54Q9P1Q0 977 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 CTSZQ9UBR2 303 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 NAP1L2Q9ULW6 460 aaPredicted RBP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 MOB4Q9Y3A3 225 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 SF3B1O75533 1304 aaKnown RBP eCLIP1.24□□□□□ -2.21
PRPF39-208ENST00000554785 HIVEP1P15822 2718 aa1.24□□□□□ -2.21
PRPF39-208ENST00000554785 ACANP16112 2415 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 JMJD1CQ15652 2540 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ANAPC1Q9H1A4 1944 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 CROCCQ5TZA2 2017 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 TRGV8A0A0C4DH27 118 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 TRBV5-4A0A0C4DH59 114 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 LOC390937A0A1W2PQ73 354 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF724A8MTY0 619 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 MEI4A8MW99 385 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 K7EQG2 157 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 NME2P1O60361 137 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 SDC3O75056 442 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 ECI2O75521 394 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 OR6B1O95007 311 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 PLEKHA8P1O95397 391 aa1.23□□□□□ -2.21
PRPF39-208ENST00000554785 APBB3O95704 486 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms