RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SOAT1P35610 550 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 EIF1P41567 113 aaKnown RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 SMCPP49901 116 aaPredicted RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF41P51814 821 aaPredicted RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 AGFG1P52594 562 aaKnown RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 ATP12AP54707 1039 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 CLDN20P56880 219 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 CD226Q15762 336 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 PGS1Q32NB8 556 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 PLPPR5Q32ZL2 321 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 KLHL26Q53HC5 615 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 BEND6Q5SZJ8 279 aaPredicted RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 CCNJQ5T5M9 372 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 ATG16L1Q676U5 607 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR4F3Q6IEY1 312 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 SPATA19Q7Z5L4 167 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 GALNT10Q86SR1 603 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 GGNQ86UU5 652 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 WDR75Q8IWA0 830 aaKnown RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZZZ3Q8IYH5 903 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 GCNT2Q8N0V5 402 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 ANKRD42Q8N9B4 389 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 CHDHQ8NE62 594 aaPredicted RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR5AK3PQ8NH89 298 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 B4GALNT2Q8NHY0 566 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 MIPOL1Q8TD10 442 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 NUDT8Q8WV74 236 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 OIT3Q8WWZ8 545 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 TLCD1Q96CP7 247 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 OTUB1Q96FW1 271 aaPredicted RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 PPP1R36Q96LQ0 422 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR7D2Q96RA2 312 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 PAIP2Q9BPZ3 127 aaKnown RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 RBM24Q9BX46 236 aaKnown RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 NMUR2Q9GZQ4 415 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 MED17Q9NVC6 651 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 PCDHGB4Q9UN71 923 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 VDAC3Q9Y277 283 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 RNF103-CHMP3A0A140T963 221 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 TRPC5OSA6NMA1 111 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 A6NNC1 897 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 E9PBE3 544 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 ADAMDEC1O15204 470 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 HDAC3O15379 428 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 SEC14L5O43304 696 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 LINGO3P0C6S8 592 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 EPXP11678 715 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 ME2P23368 584 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 ELK4P28324 431 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 ADH6P28332 368 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 CPA2P48052 419 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 SUCLG1P53597 346 aaKnown RBP9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 RAC1P63000 192 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 LRRC74AQ0VAA2 488 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 CASP8Q14790 479 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 AP1ARQ63HQ0 302 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 ESPNLQ6ZVH7 1005 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 C6orf120Q7Z4R8 191 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 CLECL1Q8IZS7 167 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 GATSQ8NAP1 163 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR4A15Q8NGL6 344 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 OR5M1Q8NGP8 315 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 ADGRG7Q96K78 797 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 SLC35G5Q96KT7 338 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 DACH2Q96NX9 599 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 SDF2Q99470 211 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 PINK1Q9BXM7 581 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 TMBIM4Q9HC24 238 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 RASSF1Q9NS23 344 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 EXD2Q9NVH0 621 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 PNPOQ9NVS9 261 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 AIG1Q9NVV5 245 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 DNAJB12Q9NXW2 375 aaKnown RBP9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 GALNT8Q9NY28 637 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 NKIRAS1Q9NYS0 192 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 ICAM5Q9UMF0 924 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 DTNAQ9Y4J8 743 aa9.36□□□□□ -0.91
PTCD2P1-201ENST00000554393 H0YC42 278 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 SDHDO14521 159 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 KLF11O14901 512 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 GMFGO60234 142 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 EIF4E2O60573 245 aaKnown RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 CD8BP10966 210 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 MATN1P21941 496 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 UQCRC2P22695 453 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 KIR2DL2P43627 348 aaPredicted RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 P2RX1P51575 399 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 TPD52P55327 224 aaPredicted RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 MAGOHP61326 146 aaKnown RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 PHC1P78364 1004 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 TXNL4AP83876 142 aaKnown RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF117Q03924 483 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 PON3Q15166 354 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 GUSBP1Q15486 140 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 TESK1Q15569 626 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF141Q15928 474 aa9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 CTU2Q2VPK5 515 aaKnown RBP9.35□□□□□ -0.91
PTCD2P1-201ENST00000554393 ARHGAP11BQ3KRB8 267 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms