RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CRATP43155 626 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 GNG10P50151 68 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ANXA11P50995 505 aaKnown RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 LUMP51884 338 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 LSM6P62312 80 aaKnown RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 PITPNAQ00169 270 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 SEMG2Q02383 582 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 OC90Q02509 493 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 ACSM1Q08AH1 577 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 RAB40BQ12829 278 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 RBM39Q14498 530 aaKnown RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 TMEM132DQ14C87 1099 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 JMJD6Q6NYC1 403 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 SFXN4Q6P4A7 337 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ZNF621Q6ZSS3 439 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ZBTB8OSQ8IWT0 167 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 CELF5Q8N6W0 485 aaKnown RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 OR52B4Q8NGK2 314 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ZNF461Q8TAF7 563 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 PANX1Q96RD7 426 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 TAAR9Q96RI9 348 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 COPS8Q99627 209 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 KLHL31Q9H511 634 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ZNF302Q9NR11 478 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 UQCC1Q9NVA1 299 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 PRKAB1Q9Y478 270 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MMACHCQ9Y4U1 282 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 TMEM184BQ9Y519 407 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 PIKFYVEQ9Y2I7 2098 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 WDR90Q96KV7 1748 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 TMEM72A0PK05 275 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 NAP1L6A6NFF2 107 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MKRN2OSH3BPM6 223 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MBTPS2O43462 519 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 PCDH7O60245 1069 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 RDH16O75452 317 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 RGS9O75916 674 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 LRATO95237 230 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 GJA1P17302 382 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 CERS1P27544 350 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 PDHA2P29803 388 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 PBLDP30039 288 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 KIR3DL1P43629 444 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 CCR8P51685 355 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ADPRHP54922 357 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 F2RL1P55085 397 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 OR10A3P58181 314 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 GMFBP60983 142 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 NHLH2Q02577 135 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 TNFRSF9Q07011 255 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 LAMTOR4Q0VGL1 99 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 NAE1Q13564 534 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 GAMTQ14353 236 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 CLINT1Q14677 625 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 OR8G1Q15617 311 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 TMEM244Q5VVB8 128 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 TAPT1Q6NXT6 567 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ZNF852Q6ZMS4 543 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 SSX6Q7RTT6 188 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 GPRIN1Q7Z2K8 1008 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 C6orf120Q7Z4R8 191 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 SCD5Q86SK9 330 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ANGPTL5Q86XS5 388 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 KCNRGQ8N5I3 272 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 IQCF1Q8N6M8 205 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 LRRC52Q8N7C0 313 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 OR9A2Q8NGT5 310 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 DTD1Q8TEA8 209 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MYLIPQ8WY64 445 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 GCDHQ92947 438 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 ARMC5Q96C12 935 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MALSU1Q96EH3 234 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 RNFT2Q96EX2 444 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 LINGO1Q96FE5 620 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ZFP3Q96NJ6 502 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 CASD1Q96PB1 797 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 NRIP2Q9BQI9 281 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ACPTQ9BZG2 426 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 SLC25A51Q9H1U9 297 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 SFXN1Q9H9B4 322 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 TPT1P8Q9HAU6 139 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 NOX3Q9HBY0 568 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MIEF1Q9NQG6 463 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MRPL15Q9P015 296 aaKnown RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 RCC2Q9P258 522 aaKnown RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 KCND3Q9UK17 655 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 FZD4Q9ULV1 537 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 RCE1Q9Y256 329 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 PCDHB11Q9Y5F2 797 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ENPP4Q9Y6X5 453 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 MYO10Q9HD67 2058 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 PATJQ8NI35 1801 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 DOCK4Q8N1I0 1966 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 A0A0D9SG52 128 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 TRBV4-1A0A0J9YWV2 114 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 IRGMA1A4Y4 181 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 GSAPA4D1B5 854 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 A6NLC8 198 aa8.91□□□□□ -0.98
SIX4-202ENST00000554079 NUDT19A8MXV4 375 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms