RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZNF26P17031 533 aaPredicted RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 CSNK2A2P19784 350 aaPredicted RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 CHMP24386 653 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 IL12BP29460 328 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 SOX18P35713 384 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 KCNJ5P48544 419 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 PKNOX1P55347 436 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 TUBA4AP68366 448 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 MRPS22P82650 360 aaKnown RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 TXNL4AP83876 142 aaKnown RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 SNTA1Q13424 505 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 GAB1Q13480 694 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 PRICKLE4Q2TBC4 344 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 UNC50Q53HI1 259 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 PPP4R4Q6NUP7 873 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 FAM180BQ6P0A1 224 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 SLC48A1Q6P1K1 146 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 C8orf82Q6P1X6 216 aaPredicted RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 COMMD6Q7Z4G1 85 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 MIER2Q8N344 545 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 NUDT8Q8WV74 236 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 SMPDL3BQ92485 455 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 HGDQ93099 445 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 TMBIM1Q969X1 311 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 RNF166Q96A37 237 aaPredicted RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 EME1Q96AY2 570 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 CCL19Q99731 98 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 PKP2Q99959 881 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 MED18Q9BUE0 208 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 FAIM2Q9BWQ8 316 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 OR2B2Q9GZK3 357 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 GSTO2Q9H4Y5 243 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 UBTD1Q9HAC8 227 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 ZNF226Q9NYT6 803 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 PTTG2Q9NZH5 202 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 MAT2BQ9NZL9 334 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 ADAM29Q9UKF5 820 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 EXO1Q9UQ84 846 aaKnown RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 PCDHA9Q9Y5H5 950 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 AP4B1Q9Y6B7 739 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 ZNF780BQ9Y6R6 833 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 FLNAP21333 2647 aaKnown RBP8□□□□□ -1.13
TDP1-208ENST00000553989 FRG2CA6NGY1 282 aa8□□□□□ -1.13
TDP1-208ENST00000553989 STX16-NPEPL1H3BU86 382 aa8□□□□□ -1.13
TDP1-208ENST00000553989 PDLIM1O00151 329 aa8□□□□□ -1.13
TDP1-208ENST00000553989 PLOD2O00469 737 aa8□□□□□ -1.13
TDP1-208ENST00000553989 OR7A17O14581 309 aa8□□□□□ -1.13
TDP1-208ENST00000553989 STX16O14662 325 aa8□□□□□ -1.13
TDP1-208ENST00000553989 HEXAP06865 529 aa8□□□□□ -1.13
TDP1-208ENST00000553989 HSD17B1P14061 328 aa8□□□□□ -1.13
TDP1-208ENST00000553989 IDO1P14902 403 aa8□□□□□ -1.13
TDP1-208ENST00000553989 HOXB6P17509 224 aaKnown RBP8□□□□□ -1.13
TDP1-208ENST00000553989 PCSK6P29122 969 aa8□□□□□ -1.13
TDP1-208ENST00000553989 SRD5A2P31213 254 aa8□□□□□ -1.13
TDP1-208ENST00000553989 PTGDSP41222 190 aa8□□□□□ -1.13
TDP1-208ENST00000553989 EEF1A1P68104 462 aaKnown RBP8□□□□□ -1.13
TDP1-208ENST00000553989 SIRPAP78324 504 aa8□□□□□ -1.13
TDP1-208ENST00000553989 LTB4RQ15722 352 aa8□□□□□ -1.13
TDP1-208ENST00000553989 UGT3A2Q3SY77 523 aa8□□□□□ -1.13
TDP1-208ENST00000553989 TRMT12Q53H54 448 aaKnown RBP8□□□□□ -1.13
TDP1-208ENST00000553989 COX20Q5RI15 118 aa8□□□□□ -1.13
TDP1-208ENST00000553989 C10orf62Q5T681 223 aaPredicted RBP8□□□□□ -1.13
TDP1-208ENST00000553989 EEF1A1P5Q5VTE0 462 aa8□□□□□ -1.13
TDP1-208ENST00000553989 FOXB2Q5VYV0 432 aa8□□□□□ -1.13
TDP1-208ENST00000553989 REP15Q6BDI9 236 aa8□□□□□ -1.13
TDP1-208ENST00000553989 OR5M10Q6IEU7 315 aa8□□□□□ -1.13
TDP1-208ENST00000553989 METTL2BQ6P1Q9 378 aaKnown RBP8□□□□□ -1.13
TDP1-208ENST00000553989 TMEM81Q6P7N7 255 aa8□□□□□ -1.13
TDP1-208ENST00000553989 ZBTB49Q6ZSB9 765 aa8□□□□□ -1.13
TDP1-208ENST00000553989 MILR1Q7Z6M3 343 aa8□□□□□ -1.13
TDP1-208ENST00000553989 PLCZ1Q86YW0 608 aa8□□□□□ -1.13
TDP1-208ENST00000553989 UBQLNLQ8IYU4 475 aa8□□□□□ -1.13
TDP1-208ENST00000553989 METTL4Q8N3J2 472 aa8□□□□□ -1.13
TDP1-208ENST00000553989 WDSUB1Q8N9V3 476 aa8□□□□□ -1.13
TDP1-208ENST00000553989 OR4K17Q8NGC6 315 aa8□□□□□ -1.13
TDP1-208ENST00000553989 SELENOMQ8WWX9 145 aa8□□□□□ -1.13
TDP1-208ENST00000553989 LZICQ8WZA0 190 aa8□□□□□ -1.13
TDP1-208ENST00000553989 PIGTQ969N2 578 aa8□□□□□ -1.13
TDP1-208ENST00000553989 NTNG2Q96CW9 530 aa8□□□□□ -1.13
TDP1-208ENST00000553989 PIK3IP1Q96FE7 263 aa8□□□□□ -1.13
TDP1-208ENST00000553989 PERPQ96FX8 193 aa8□□□□□ -1.13
TDP1-208ENST00000553989 Q96MF0 132 aa8□□□□□ -1.13
TDP1-208ENST00000553989 NSUN5Q96P11 429 aaKnown RBP8□□□□□ -1.13
TDP1-208ENST00000553989 COL21A1Q96P44 957 aa8□□□□□ -1.13
TDP1-208ENST00000553989 ADOQ96SZ5 270 aa8□□□□□ -1.13
TDP1-208ENST00000553989 C1QTNF3Q9BXJ4 246 aa8□□□□□ -1.13
TDP1-208ENST00000553989 AKTIPQ9H8T0 292 aa8□□□□□ -1.13
TDP1-208ENST00000553989 KLHL28Q9NXS3 571 aa8□□□□□ -1.13
TDP1-208ENST00000553989 CLCF1Q9UBD9 225 aa8□□□□□ -1.13
TDP1-208ENST00000553989 FBXL2Q9UKC9 423 aa8□□□□□ -1.13
TDP1-208ENST00000553989 UTS2RQ9UKP6 389 aa8□□□□□ -1.13
TDP1-208ENST00000553989 SNX6Q9UNH7 406 aa8□□□□□ -1.13
TDP1-208ENST00000553989 AP3M1Q9Y2T2 418 aa8□□□□□ -1.13
TDP1-208ENST00000553989 TESMINQ9Y4I5 508 aa8□□□□□ -1.13
TDP1-208ENST00000553989 WIF1Q9Y5W5 379 aa8□□□□□ -1.13
TDP1-208ENST00000553989 DOCK7Q96N67 2140 aa8□□□□□ -1.13
TDP1-208ENST00000553989 ZNF469Q96JG9 3925 aaPredicted RBP8□□□□□ -1.13
TDP1-208ENST00000553989 EXPH5Q8NEV8 1989 aa7.99□□□□□ -1.13
TDP1-208ENST00000553989 A0A1B0GTL3 188 aa7.99□□□□□ -1.13
TDP1-208ENST00000553989 A0A1W2PNV4 684 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms