RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RGCCQ9H4X1 137 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 GEMIN7Q9H840 131 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 CCNB1IP1Q9NPC3 277 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 NRN1Q9NPD7 142 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TUBG2Q9NRH3 451 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.92□□□□□ -2.1
SRP54-204ENST00000553923 SMOXQ9NWM0 555 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 DUS2Q9NX74 493 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 TAS2R16Q9NYV7 291 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 NLGN3Q9NZ94 848 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 KLRF1Q9NZS2 232 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PIPOXQ9P0Z9 390 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PSMC3IPQ9P2W1 217 aaPredicted RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 EIF3KQ9UBQ5 218 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 SLC7A8Q9UHI5 535 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PRDM4Q9UKN5 801 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ABCG2Q9UNQ0 655 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CA5BQ9Y2D0 317 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PPP2R2CQ9Y2T4 447 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TIMM10BQ9Y5J6 103 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 N6AMT1Q9Y5N5 214 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 NPTNQ9Y639 398 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ALG6Q9Y672 507 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 BZW2Q9Y6E2 419 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 AFF2P51816 1311 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ATP10DQ9P241 1426 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 KIAA1217Q5T5P2 1943 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PPIAL4EA0A075B759 164 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 IGLV9-49A0A0B4J1Y8 123 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 LOC100506127A0A0U1RQW1 187 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 LOC390937A0A1W2PQ73 354 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 LRP5LA4QPB2 252 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 LRIT2A6NDA9 550 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 OR5H15A6NDH6 313 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 GLTPD2A6NH11 291 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 C12orf71A8MTZ7 269 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 KLLNB2CW77 178 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ZNF879B4DU55 563 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 NEDD8-MDP1E9PL57 170 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 LMO7DNF2Z398 122 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 G3V4G9 280 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 K7ERQ8 282 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SLC1A7O00341 560 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 BTN3A3O00478 584 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CCSO14618 274 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 IMPA2O14732 288 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 BCKDKO14874 412 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ATP6V0E1O15342 81 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 NBR2O15453 112 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 P2RX6O15547 441 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 RANBP6O60518 1105 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 UPK3AO75631 287 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 AP2A2O94973 939 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 DIRAS1O95057 198 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 TGM6O95932 706 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 RPLP0P05388 317 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 FCER2P06734 321 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CAPN1P07384 714 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PPIAL4FP0DN26 164 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 MCF2P10911 925 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ETS2P15036 469 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PRKACAP17612 351 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 RPL35AP18077 110 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 CA6P23280 308 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 GTF2E2P29084 291 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 FEN1P39748 380 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 BDKRB1P46663 353 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 STARP49675 285 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 FHITP49789 147 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 NOVA1P51513 510 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 SLC7A2P52569 658 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 NDST2P52849 883 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CRYBB1P53674 252 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 CLDN8P56748 225 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 RPL27P61353 136 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 XIAPP98170 497 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 OC90Q02509 493 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 RBBP4Q09028 425 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ZP4Q12836 540 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 GPR17Q13304 367 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ILKQ13418 452 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 MESDQ14696 234 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ANGPT1Q15389 498 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ZNF74Q16587 644 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 MICBQ29980 383 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 KLHL40Q2TBA0 621 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 Q3ZCU0 254 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ACSF3Q4G176 576 aaPredicted RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 SBK1Q52WX2 424 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 HSP90AA4PQ58FG1 418 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 DMRTC1Q5HYR2 192 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SPANXN4Q5MJ08 99 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 CELF3Q5SZQ8 465 aaKnown RBP1.91□□□□□ -2.1
SRP54-204ENST00000553923 C1orf189Q5VU69 101 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 LIPNQ5VXI9 398 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 PLPP4Q5VZY2 271 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SLC22A10Q63ZE4 541 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 SLC8B1Q6J4K2 584 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ACSM5Q6NUN0 579 aa1.91□□□□□ -2.1
SRP54-204ENST00000553923 ERICH5Q6P6B1 374 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms