RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ZNF99A8MXY4 864 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 OR5F1O95221 314 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 AK1P00568 194 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 PSMB9P28065 219 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 DAB2P98082 770 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 PEAR1Q5VY43 1037 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 LCN10Q6JVE6 187 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 CARFQ8N187 725 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 ZNF721Q8TF20 911 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 ACOT11Q8WXI4 607 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 SLC35B4Q969S0 331 aa11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 AKIRIN1Q9H9L7 192 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.76□□□□□ -0.53
VIPAS39-206ENST00000553888 GMFGO60234 142 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 TRMUO75648 421 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 RFPL3O75679 317 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 ITIH1P19827 911 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 ST3GAL4Q11206 333 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 TMED1Q13445 227 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 LSAMPQ13449 338 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 SLC30A6Q6NXT4 461 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 QSOX2Q6ZRP7 698 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 MED25Q71SY5 747 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 KMT5CQ86Y97 462 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 POGLUT1Q8NBL1 392 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 PIGXQ8TBF5 258 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 MVB12AQ96EY5 273 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 ZC3H10Q96K80 434 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 OR1F2PQ96R84 312 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 DPH1Q9BZG8 443 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 ARMC7Q9H6L4 198 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 TCRBV16S1A1N1A0A5B0 115 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 TRAPPC13A5PLN9 417 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 OIP5O43482 229 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 TLX2O43763 284 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 APOL3O95236 402 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 IFI6P09912 130 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 MAKP20794 623 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 DRD5P21918 477 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 GIPRP48546 466 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 LSM3P62310 102 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 DECR1Q16698 335 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 CASP12Q6UXS9 341 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 C16orf47Q6ZP98 133 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 SLC16A12Q6ZSM3 486 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 PRSS48Q7RTY5 328 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 GNPDA2Q8TDQ7 276 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 FKBP10Q96AY3 582 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 ENKD1Q9H0I2 346 aa11.75□□□□□ -0.53
VIPAS39-206ENST00000553888 NPIPB9F8W1W9 429 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 PNLIPP16233 465 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 TGFBR1P36897 503 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 ACAA2P42765 397 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 MBOAT2Q6ZWT7 520 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 C9orf40Q8IXQ3 194 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 CADM2Q8N3J6 435 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 FAM181AQ8N9Y4 354 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 OR4D9Q8NGE8 314 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 OR4Q3Q8NH05 313 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 RORBQ92753 470 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 TUBA1CQ9BQE3 449 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 FKBP14Q9NWM8 211 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 ENOPH1Q9UHY7 261 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 MMACHCQ9Y4U1 282 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 SCRG1O75711 98 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 IGKV3-11P04433 115 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 CDK1P06493 297 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 NGFRP08138 427 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 TSPAN31Q12999 210 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 AQP6Q13520 282 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 CD226Q15762 336 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 APOOLQ6UXV4 268 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 CD300LDQ6UXZ3 194 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 STT3BQ8TCJ2 826 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 PMEPA1Q969W9 287 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 ZNF524Q96C55 264 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 RTN4RQ9BZR6 473 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 CELSR3Q9NYQ7 3312 aa11.74□□□□□ -0.53
VIPAS39-206ENST00000553888 A0A1B0GWA3 101 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 SLC2A10O95528 541 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 PTHP01270 115 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 IFNA8P32881 189 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 CDK5Q00535 292 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 STX19Q8N4C7 294 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 ARRDC1-AS1Q9H2J1 176 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 MEPEQ9NQ76 525 aaPredicted RBP11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 ENAMQ9NRM1 1142 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 PLCXD1Q9NUJ7 323 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 CLN6Q9NWW5 311 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 PCDHGB1Q9Y5G3 927 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 KLF4O43474 513 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 MTRF1O75570 445 aaKnown RBP11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 IFI30P13284 250 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 ATP12AP54707 1039 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 FXYD6P3P58550 94 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 COX10Q12887 443 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 FGFBP1Q14512 234 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 SNAPC1Q16533 368 aa11.73□□□□□ -0.53
VIPAS39-206ENST00000553888 RHBDD2Q6NTF9 364 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms