RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MPDZO75970 2070 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 A8MXE2 369 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 SNNO75324 88 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-206ENST00000553529 CGAP01215 116 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 OR12D1P0DN82 309 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 LBPP18428 481 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 MATN1P21941 496 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 SFTPDP35247 375 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 PLAURQ03405 335 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 GPR68Q15743 365 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 MAPK14Q16539 360 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 LSM12Q3MHD2 195 aaKnown RBP16.35■□□□□ 0.21
SHMT2-206ENST00000553529 FAM174BQ3ZCQ3 159 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 SLC9B1Q4ZJI4 515 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 PDZK1Q5T2W1 519 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 ZNF550Q7Z398 422 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 WDR75Q8IWA0 830 aaKnown RBP16.35■□□□□ 0.21
SHMT2-206ENST00000553529 ZNF610Q8N9Z0 462 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 TLCD1Q96CP7 247 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 ZG16BQ96DA0 208 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 DNAJA3Q96EY1 480 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 SLC35G5Q96KT7 338 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 SDF2Q99470 211 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 SRXN1Q9BYN0 137 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 QRSL1Q9H0R6 528 aaKnown RBP16.35■□□□□ 0.21
SHMT2-206ENST00000553529 RNF122Q9H9V4 155 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 TMBIM4Q9HC24 238 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 MKLN1Q9UL63 735 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 ICAM5Q9UMF0 924 aa16.35■□□□□ 0.21
SHMT2-206ENST00000553529 CLDN24A6NM45 220 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 GSNP06396 782 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 HPGDP15428 266 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 CAPN3P20807 821 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 ART1P52961 327 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 GUSBP1Q15486 140 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 ANKRD34AQ69YU3 496 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 CHMP1BQ7LBR1 199 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 GTPBP8Q8N3Z3 284 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-206ENST00000553529 FBXO27Q8NI29 283 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 ROBO4Q8WZ75 1007 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 SLC6A13Q9NSD5 602 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 AIG1Q9NVV5 245 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 KLHL28Q9NXS3 571 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 C6orf203Q9P0P8 240 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-206ENST00000553529 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-206ENST00000553529 AP4B1Q9Y6B7 739 aa16.34■□□□□ 0.21
SHMT2-206ENST00000553529 A0A1W2PQD3 144 aa16.33■□□□□ 0.2
SHMT2-206ENST00000553529 RNASET2O00584 256 aaKnown RBP16.33■□□□□ 0.2
SHMT2-206ENST00000553529 ATP6V1C1P21283 382 aa16.33■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF41P51814 821 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-206ENST00000553529 MAD2L1Q13257 205 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-206ENST00000553529 SGCBQ16585 318 aa16.33■□□□□ 0.2
SHMT2-206ENST00000553529 DNAJC14Q6Y2X3 702 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-206ENST00000553529 OR8J2Q8NGG1 315 aa16.33■□□□□ 0.2
SHMT2-206ENST00000553529 PNPT1Q8TCS8 783 aaKnown RBP16.33■□□□□ 0.2
SHMT2-206ENST00000553529 FAM222BQ8WU58 562 aa16.33■□□□□ 0.2
SHMT2-206ENST00000553529 PRPF18Q99633 342 aaKnown RBP16.33■□□□□ 0.2
SHMT2-206ENST00000553529 NEUROD4Q9HD90 331 aa16.33■□□□□ 0.2
SHMT2-206ENST00000553529 ANKRD17O75179 2603 aaKnown RBP16.32■□□□□ 0.2
SHMT2-206ENST00000553529 IGHV3-15A0A0B4J1V0 119 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 SH3D21A4FU49 640 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 UGT2B17O75795 530 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 CYP7B1O75881 506 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 NUDT14O95848 222 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 EPXP11678 715 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 CD1EP15812 388 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF17P17021 662 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 CCR4P51679 360 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 ATP12AP54707 1039 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 OCRLQ01968 901 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 CASP8Q14790 479 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 EXOC3L2Q2M3D2 409 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 GLYR1Q49A26 553 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-206ENST00000553529 GTDC1Q4AE62 458 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 COX20Q5RI15 118 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 HEATR5AQ86XA9 2040 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 TMCO5AQ8N6Q1 288 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 GPR119Q8TDV5 335 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 ZC3HAV1LQ96H79 300 aaKnown RBP16.32■□□□□ 0.2
SHMT2-206ENST00000553529 ZFP3Q96NJ6 502 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 WFIKKN1Q96NZ8 548 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 OR52B2Q96RD2 323 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 GPR45Q9Y5Y3 372 aa16.32■□□□□ 0.2
SHMT2-206ENST00000553529 TEP1Q99973 2627 aaKnown RBP16.32■□□□□ 0.2
SHMT2-206ENST00000553529 CCDC168Q8NDH2 2452 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 A0A1W2PNR3 127 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 E9PBE3 544 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 ZNF195O14628 629 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 ADAM11O75078 769 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 HRGP04196 525 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 PRKCAP17252 672 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 DAZAP2Q15038 168 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-206ENST00000553529 SMU1Q2TAY7 513 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 SAXO2Q658L1 398 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 TYW3Q6IPR3 259 aaKnown RBP16.31■□□□□ 0.2
SHMT2-206ENST00000553529 LILRA2Q8N149 483 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 CHDHQ8NE62 594 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-206ENST00000553529 OR9I1Q8NGQ6 314 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 OR2V1Q8NHB1 315 aa16.31■□□□□ 0.2
SHMT2-206ENST00000553529 ABHD3Q8WU67 409 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms