RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ICAM5Q9UMF0 924 aa16.7■□□□□ 0.26
CPSF2-202ENST00000553427 RPH3AQ9Y2J0 694 aaPredicted RBP16.7■□□□□ 0.26
CPSF2-202ENST00000553427 TRBV5-3A0A0A0MS03 114 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 A1L4Q6 167 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 DYNC1I1O14576 645 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 DNAJA2O60884 412 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 H6PDO95479 791 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 CLDN14O95500 239 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 CHRM4P08173 479 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 UBL4AP11441 157 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 PEPDP12955 493 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 PPIBP23284 216 aaKnown RBP16.69■□□□□ 0.26
CPSF2-202ENST00000553427 P2RX1P51575 399 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 ZNF41P51814 821 aaPredicted RBP16.69■□□□□ 0.26
CPSF2-202ENST00000553427 GPAT3Q53EU6 434 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 PAGE3Q5JUK9 113 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 MSRB3Q8IXL7 192 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 DPP10Q8N608 796 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 ANKFN1Q8N957 763 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 FAM71CQ8NEG0 241 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 AURKBQ96GD4 344 aaPredicted RBP16.69■□□□□ 0.26
CPSF2-202ENST00000553427 SH3YL1Q96HL8 342 aaPredicted RBP16.69■□□□□ 0.26
CPSF2-202ENST00000553427 ALKBH4Q9NXW9 302 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 SLC25A37Q9NYZ2 338 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 LEF1Q9UJU2 399 aaPredicted RBP16.69■□□□□ 0.26
CPSF2-202ENST00000553427 SLC35A3Q9Y2D2 325 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 L3MBTL1Q9Y468 752 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 AP4B1Q9Y6B7 739 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 MED12Q93074 2177 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 UNC79Q9P2D8 2635 aa16.69■□□□□ 0.26
CPSF2-202ENST00000553427 CENPVL1A0A0U1RR11 272 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 H0Y3Z8 333 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 CLIC1O00299 241 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 ETV2O00321 342 aaPredicted RBP16.68■□□□□ 0.26
CPSF2-202ENST00000553427 ZNF264O43296 627 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 OIP5O43482 229 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 LINGO3P0C6S8 592 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 ETFAP13804 333 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 POU3F2P20265 443 aaPredicted RBP16.68■□□□□ 0.26
CPSF2-202ENST00000553427 RPS4Y1P22090 263 aaKnown RBP16.68■□□□□ 0.26
CPSF2-202ENST00000553427 TIMP3P35625 211 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 EIF1P41567 113 aaKnown RBP16.68■□□□□ 0.26
CPSF2-202ENST00000553427 DSTNP60981 165 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 CHRNEQ04844 493 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 SKP2Q13309 424 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 FGFBP1Q14512 234 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 MAPK14Q16539 360 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 SYPL1Q16563 259 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 CBLN3Q6UW01 205 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 SEM1Q6ZVN7 128 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 EIF3MQ7L2H7 374 aaKnown RBP16.68■□□□□ 0.26
CPSF2-202ENST00000553427 ZNF614Q8N883 585 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 OR5W2Q8NH69 310 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 SDCCAG3Q96C92 435 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 LAT2Q9GZY6 243 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 CALML5Q9NZT1 146 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 CARD8Q9Y2G2 431 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 DSPPQ9NZW4 1301 aa16.68■□□□□ 0.26
CPSF2-202ENST00000553427 NBPF19A0A087WUL8 3843 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 MBD3L4A6NDZ8 208 aaPredicted RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 MBD3L3A6NE82 208 aaPredicted RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 AGAP5A6NIR3 686 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 MBD3L5A6NJ08 208 aaPredicted RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 GTPBP1O00178 669 aaKnown RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 NR2F1P10589 423 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 CD1EP15812 388 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 PSMA4P25789 261 aaKnown RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 ELK4P28324 431 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 ADH6P28332 368 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 CEACAM8P31997 349 aaPredicted RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 CRATP43155 626 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 GNA13Q14344 377 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 RGNQ15493 299 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 MAPK11Q15759 364 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 PRAMEF8Q5VWM4 474 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 PRAMEF7Q5VXH5 474 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 OLIG3Q7RTU3 272 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 CMIPQ8IY22 773 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 LILRB4Q8NHJ6 448 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 MBD3L2Q8NHZ7 208 aaPredicted RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 TUBA1CQ9BQE3 449 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 RUBCNLQ9H714 662 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 MTHFD2LQ9H903 347 aaPredicted RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 EXOSC3Q9NQT5 275 aaKnown RBP16.67■□□□□ 0.26
CPSF2-202ENST00000553427 VAPAQ9P0L0 249 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 STOML1Q9UBI4 398 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 VDAC3Q9Y277 283 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 ZNF337Q9Y3M9 751 aa16.67■□□□□ 0.26
CPSF2-202ENST00000553427 A0A0G2JNJ9 132 aa16.66■□□□□ 0.26
CPSF2-202ENST00000553427 HSPB2A8KAH6 182 aa16.66■□□□□ 0.26
CPSF2-202ENST00000553427 CSTAP01040 98 aa16.66■□□□□ 0.26
CPSF2-202ENST00000553427 SNRPB2P08579 225 aaKnown RBP16.66■□□□□ 0.26
CPSF2-202ENST00000553427 TFPTP0C1Z6 253 aa16.66■□□□□ 0.26
CPSF2-202ENST00000553427 TCEA1P23193 301 aaKnown RBP16.66■□□□□ 0.26
CPSF2-202ENST00000553427 ADSLP30566 484 aaPredicted RBP16.66■□□□□ 0.26
CPSF2-202ENST00000553427 PGM1P36871 562 aa16.66■□□□□ 0.26
CPSF2-202ENST00000553427 STARP49675 285 aa16.66■□□□□ 0.26
CPSF2-202ENST00000553427 CRISP3P54108 245 aa16.66■□□□□ 0.26
CPSF2-202ENST00000553427 EEFSECP57772 596 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms