RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SIKE1Q9BRV8 207 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 SFXN3Q9BWM7 321 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 SERHL2Q9H4I8 314 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 WDR45Q9Y484 360 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 NCKAP5O14513 1909 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 SERINC4A6NH21 518 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 C9JVG2 144 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF264O43296 627 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 FCMRO60667 390 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 NUDT14O95848 222 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 CRHP06850 196 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 SNRPB2P08579 225 aaKnown RBP13.84□□□□□ -0.19
SHMT2-204ENST00000553324 IGFBP2P18065 325 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 SSTR2P30874 369 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF136P52737 540 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 SGCBQ16585 318 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 PLPPR5Q32ZL2 321 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 EIF3MQ7L2H7 374 aaKnown RBP13.84□□□□□ -0.19
SHMT2-204ENST00000553324 RNF130Q86XS8 419 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 DMRTC2Q8IXT2 367 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-204ENST00000553324 UBQLNLQ8IYU4 475 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 ARFGAP2Q8N6H7 521 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF614Q8N883 585 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 C9orf106Q8NAJ2 232 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 NAXEQ8NCW5 288 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 OR5M1Q8NGP8 315 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 OR5W2Q8NH69 310 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 MARK4Q96L34 752 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 TRNT1Q96Q11 434 aaKnown RBP13.84□□□□□ -0.19
SHMT2-204ENST00000553324 INPP5KQ9BT40 448 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 SAP130Q9H0E3 1048 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 RABEP2Q9H5N1 569 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 THUMPD1Q9NXG2 353 aaKnown RBP13.84□□□□□ -0.19
SHMT2-204ENST00000553324 CLCF1Q9UBD9 225 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 MKLN1Q9UL63 735 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 ICAM5Q9UMF0 924 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 CARD8Q9Y2G2 431 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 GPC6Q9Y625 555 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-204ENST00000553324 NUP214P35658 2090 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-204ENST00000553324 FREM3P0C091 2139 aa13.84□□□□□ -0.19
SHMT2-204ENST00000553324 NPIPA5A0A0B4J1W7 369 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 SLC22A20A6NK97 555 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 GJE1A6NN92 205 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 KDM4EB2RXH2 506 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-204ENST00000553324 NPIPA7E9PJI5 369 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 HMGN4O00479 90 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 UGT2B17O75795 530 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 LINGO3P0C6S8 592 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 NPIPA8P0DM63 369 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 UBL4AP11441 157 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 CDKN2CP42773 168 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 ASCL1P50553 236 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 CASP9P55211 416 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 ZNF117Q03924 483 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 CBFBQ13951 182 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 FBXL19-AS1Q494R0 122 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 GPAT3Q53EU6 434 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 HSP90B2PQ58FF3 399 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.83□□□□□ -0.2
SHMT2-204ENST00000553324 PDSS1Q5T2R2 415 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 ZNF619Q8N2I2 560 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 METTL25Q8N6Q8 603 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 RAB8BQ92930 207 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 ARSGQ96EG1 525 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 C14orf79Q96F83 325 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 LAT2Q9GZY6 243 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 PIGMQ9H3S5 423 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 MTHFD2LQ9H903 347 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-204ENST00000553324 NPDC1Q9NQX5 325 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-204ENST00000553324 TRIM33Q9UPN9 1127 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 SLC35A3Q9Y2D2 325 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 ZNF175Q9Y473 711 aa13.83□□□□□ -0.2
SHMT2-204ENST00000553324 CENPEQ02224 2701 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 SEC14L5O43304 696 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 KIAA0513O60268 411 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 CSTAP01040 98 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 GSNP06396 782 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 ELK4P28324 431 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 ATP4BP51164 291 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 SUCLG1P53597 346 aaKnown RBP13.82□□□□□ -0.2
SHMT2-204ENST00000553324 CLDN15P56746 228 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 CLDN20P56880 219 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 GNA13Q14344 377 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 FGFBP1Q14512 234 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 C6orf10Q5SRN2 563 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 TYW3Q6IPR3 259 aaKnown RBP13.82□□□□□ -0.2
SHMT2-204ENST00000553324 POMZP3Q6PJE2 187 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 CBLN3Q6UW01 205 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 LRRC74BQ6ZQY2 392 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 ESPNLQ6ZVH7 1005 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 KIF18BQ86Y91 864 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 GPR119Q8TDV5 335 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 ZFP90Q8TF47 636 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 SMPDL3BQ92485 455 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 RNASE6Q93091 150 aaKnown RBP13.82□□□□□ -0.2
SHMT2-204ENST00000553324 INTS12Q96CB8 462 aaKnown RBP13.82□□□□□ -0.2
SHMT2-204ENST00000553324 MRGPRX4Q96LA9 322 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 RNF145Q96MT1 663 aa13.82□□□□□ -0.2
SHMT2-204ENST00000553324 EBF4Q9BQW3 602 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms