RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SLC35G5Q96KT7 338 aa11.65□□□□□ -0.54
ACTN1-207ENST00000553290 RNF145Q96MT1 663 aa11.65□□□□□ -0.54
ACTN1-207ENST00000553290 DACH2Q96NX9 599 aa11.65□□□□□ -0.54
ACTN1-207ENST00000553290 SDF2Q99470 211 aa11.65□□□□□ -0.54
ACTN1-207ENST00000553290 THAP1Q9NVV9 213 aa11.65□□□□□ -0.54
ACTN1-207ENST00000553290 NDRG3Q9UGV2 375 aa11.65□□□□□ -0.54
ACTN1-207ENST00000553290 MCTS1Q9ULC4 181 aaKnown RBP11.65□□□□□ -0.54
ACTN1-207ENST00000553290 DTNAQ9Y4J8 743 aa11.65□□□□□ -0.54
ACTN1-207ENST00000553290 NPIPA5A0A0B4J1W7 369 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 RNF103-CHMP3A0A140T963 221 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 TRPC5OSA6NMA1 111 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 NPIPA7E9PJI5 369 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 NPIPB9F8W1W9 429 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 GTPBP1O00178 669 aaKnown RBP11.64□□□□□ -0.55
ACTN1-207ENST00000553290 ADAMDEC1O15204 470 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 HDAC3O15379 428 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 SCN2BO60939 215 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 NUDT14O95848 222 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 AGR2O95994 175 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 LINGO3P0C6S8 592 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 NPIPA8P0DM63 369 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 UQCRC2P22695 453 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 ELK4P28324 431 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 ADH6P28332 368 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 EIF1AXP47813 144 aaKnown RBP11.64□□□□□ -0.55
ACTN1-207ENST00000553290 FBXW10Q5XX13 1052 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 ATG16L1Q676U5 607 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 VWA1Q6PCB0 445 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 SPNS3Q6ZMD2 512 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 SPATA19Q7Z5L4 167 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 BTLAQ7Z6A9 289 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 OR5D16Q8NGK9 328 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 RAB3IL1Q8TBN0 382 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 MIPOL1Q8TD10 442 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 ADGRG7Q96K78 797 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 PRRG4Q9BZD6 226 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 NMUR2Q9GZQ4 415 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 EXD2Q9NVH0 621 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 CARD8Q9Y2G2 431 aa11.64□□□□□ -0.55
ACTN1-207ENST00000553290 HRNRQ86YZ3 2850 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SH3D21A4FU49 640 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 E9PBE3 544 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SLCO1B7G3V0H7 640 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SDHDO14521 159 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 EIF4E2O60573 245 aaKnown RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SNNO75324 88 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 STX11O75558 287 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SYNGR4O95473 234 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CPSF4O95639 269 aaKnown RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CD8BP10966 210 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CD1EP15812 388 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 S100A3P33764 101 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CPOXP36551 454 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CD79BP40259 229 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 MAGOHP61326 146 aaKnown RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 RPS26P62854 115 aaKnown RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SIRPAP78324 504 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 PHC1P78364 1004 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CASP8Q14790 479 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 GUSBP1Q15486 140 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CTU2Q2VPK5 515 aaKnown RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 ARHGAP11BQ3KRB8 267 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SPANXN4Q5MJ08 99 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 BEND6Q5SZJ8 279 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 ATAD3BQ5T9A4 648 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 PPP4R4Q6NUP7 873 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CBLN3Q6UW01 205 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 FAM214BQ7L5A3 538 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 ANKRD46Q86W74 232 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 CDC20BQ86Y33 519 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 LILRA2Q8N149 483 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF614Q8N883 585 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 OR10D3Q8NH80 312 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 OR2V1Q8NHB1 315 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 POC1BQ8TC44 478 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 MGARPQ8TDB4 240 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 NRGNQ92686 78 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 TLCD1Q96CP7 247 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 NPAS1Q99742 590 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SLC39A3Q9BRY0 314 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 OR51I1Q9H343 314 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 SERHL2Q9H4I8 314 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 TMBIM4Q9HC24 238 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 GLRX2Q9NS18 164 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 AIG1Q9NVV5 245 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 ELOVL5Q9NYP7 299 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 ICAM5Q9UMF0 924 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 PROCRQ9UNN8 238 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 EMC9Q9Y3B6 208 aa11.63□□□□□ -0.55
ACTN1-207ENST00000553290 GPC6Q9Y625 555 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-207ENST00000553290 UQCRHLA0A096LP55 91 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 A0A0J9YW62 118 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 GJE1A6NN92 205 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 TNFSF11O14788 317 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 CASKO14936 926 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 ZNF264O43296 627 aa11.62□□□□□ -0.55
ACTN1-207ENST00000553290 CXCL13O43927 109 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms