RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TMEM185BQ9H7F4 350 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF556Q9HAH1 456 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 SIGLEC8Q9NYZ4 499 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 IKZF2Q9UKS7 526 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 ABCG2Q9UNQ0 655 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 ATP10AO60312 1499 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 MROH5Q6ZUA9 1318 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 TRGV8A0A0C4DH27 118 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 MEIOCA2RUB1 952 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 ACOD1A6NK06 481 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 DIRAS1O95057 198 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 IGHG1P01857 330 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 FDFT1P37268 417 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 C21orf59P57076 290 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 RGS8P57771 180 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-208ENST00000553278 RPS15P62841 145 aaKnown RBP4.8□□□□□ -1.64
SCFD1-208ENST00000553278 OC90Q02509 493 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF33BQ06732 778 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 NDUFA9Q16795 377 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 KLHL38Q2WGJ6 581 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 SLC25A52Q3SY17 297 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 OTUD3Q5T2D3 398 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-208ENST00000553278 SEL1L2Q5TEA6 688 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 LIPNQ5VXI9 398 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 BSPRYQ5W0U4 402 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 REP15Q6BDI9 236 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 LUZP2Q86TE4 346 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 ERICH1Q86X53 443 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 LINC01561Q8N1V8 128 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 METTL4Q8N3J2 472 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 BPIFCQ8NFQ6 507 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 OR4C5Q8NGB2 326 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 FNDC8Q8TC99 324 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 TSEN15Q8WW01 171 aaKnown RBP4.8□□□□□ -1.64
SCFD1-208ENST00000553278 NTNG2Q96CW9 530 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 RAB3CQ96E17 227 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 AGAP3Q96P47 875 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 MTMR9Q96QG7 549 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 LGMNQ99538 433 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 NIPSNAP3BQ9BS92 247 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 SPATA16Q9BXB7 569 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 IKZF5Q9H5V7 419 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 PLCXD1Q9NUJ7 323 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 ELOVL2Q9NXB9 296 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 NDE1Q9NXR1 346 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 PRPF19Q9UMS4 504 aaKnown RBP4.8□□□□□ -1.64
SCFD1-208ENST00000553278 AUP1Q9Y679 476 aa4.8□□□□□ -1.64
SCFD1-208ENST00000553278 METP08581 1390 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 NINLQ9Y2I6 1382 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 SMCO3A2RU48 225 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 OR2AG2A6NM03 316 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 LSM1O15116 133 aaKnown RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 ARHGEF9O43307 516 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 PRKAB2O43741 272 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 IGHG3P01860 377 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 POLR2MP0CAP2 368 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 ATP1B2P14415 290 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 CHMLP26374 656 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 HMGB2P26583 209 aaKnown RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 CCKARP32238 428 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 CRYBB2P43320 205 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 DUSP3P51452 185 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 DLX5P56178 289 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 FKBP3Q00688 224 aaKnown RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 MERTKQ12866 999 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 PEX6Q13608 980 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 LAGE3Q14657 143 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 SLC15A2Q16348 729 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 TMEM52BQ4KMG9 183 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 ADAMTSL4-AS1Q5T5F5 129 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 WSCD1Q658N2 575 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 EIF3MQ7L2H7 374 aaKnown RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 TPRA1Q86W33 373 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 TRIM69Q86WT6 500 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 ZFAND4Q86XD8 727 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 OFCC1Q8IZS5 231 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 RFESDQ8TAC1 157 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 GIMAP1Q8WWP7 306 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 HAVCR1Q96D42 359 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 TIMD4Q96H15 378 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 IFT74Q96LB3 600 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 OR5B2Q96R09 309 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 TRIM62Q9BVG3 475 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 SLITRK2Q9H156 845 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 AZI2Q9H6S1 392 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF160Q9HCG1 818 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 ABCC13Q9NSE7 274 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 GCNT4Q9P109 453 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 AK6Q9Y3D8 172 aaKnown RBP4.79□□□□□ -1.64
SCFD1-208ENST00000553278 CPQQ9Y646 472 aa4.79□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF840PA6NDX5 716 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 TRABD2BA6NFA1 517 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 ARHGEF33A8MVX0 844 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 PDHXO00330 501 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 RS1O15537 224 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 KCNAB3O43448 404 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 UGT2B17O75795 530 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 AP2A1O95782 977 aa4.78□□□□□ -1.64
SCFD1-208ENST00000553278 CST1P01037 141 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms