RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 GNA13Q14344 377 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 FGFBP1Q14512 234 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SYPL1Q16563 259 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 TRMT5Q32P41 509 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 GLYR1Q49A26 553 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 GXYLT1Q4G148 440 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 DCST1Q5T197 706 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 PRAMEF8Q5VWM4 474 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 PRAMEF7Q5VXH5 474 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 RAET1LQ5VY80 246 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ENPP6Q6UWR7 440 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 DLEU7Q6UYE1 221 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 RETREG3Q86VR2 466 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ULK2Q8IYT8 1036 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ANKFN1Q8N957 763 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 FAM71CQ8NEG0 241 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 B4GALNT2Q8NHY0 566 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ABTB1Q969K4 478 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ZBTB8AQ96BR9 441 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SFXN2Q96NB2 322 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 TIMP4Q99727 224 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 PIGQQ9BRB3 760 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 RUBCNLQ9H714 662 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 A4GALTQ9NPC4 353 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SLAMF8Q9P0V8 285 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 TNFRSF10DQ9UBN6 386 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SLC35A3Q9Y2D2 325 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 GMNCA6NCL1 334 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 AGAP5A6NIR3 686 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 FAM47E-STBD1D6RA91 191 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF264O43296 627 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 SNX3O60493 162 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 EIF4E2O60573 245 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 ZG16O60844 167 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 BCHEP06276 602 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 NUDT7P0C024 238 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 RNF224P0DH78 156 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 LHX2P50458 406 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 P2RX1P51575 399 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 LSM11P83369 360 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 NFYCQ13952 458 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 MAPK11Q15759 364 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 TMEM44Q2T9K0 475 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 PLPPR5Q32ZL2 321 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 GCNT6Q5T4J0 391 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 C1orf185Q5T7R7 199 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF585AQ6P3V2 769 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 ARSKQ6UWY0 536 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 C3P1Q6ZMU1 363 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 EIF3MQ7L2H7 374 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 OLIG3Q7RTU3 272 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 CMIPQ8IY22 773 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 GTPBP8Q8N3Z3 284 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 TMCO5AQ8N6Q1 288 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 OR5M9Q8NGP3 310 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 TMEM19Q96HH6 336 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 SH3YL1Q96HL8 342 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 CGREF1Q99674 301 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 FAM107BQ9H098 131 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 MED17Q9NVC6 651 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 ICAM5Q9UMF0 924 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 RPH3AQ9Y2J0 694 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 FAM215AQ9Y5M1 114 aa10.61□□□□□ -0.71
TRAFD1-209ENST00000552896 OR2M5A3KFT3 312 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 EVPLLA8MZ36 301 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 GTPBP1O00178 669 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 FBP2O00757 339 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 OIP5O43482 229 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 GMFGO60234 142 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CCDC22O60826 627 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 DNAJA2O60884 412 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CSTAP01040 98 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 DBIP07108 87 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 TFPTP0C1Z6 253 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ARAFP10398 606 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CPN1P15169 458 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF708P17019 499 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 GPX2P18283 190 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 AGAP20933 346 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 TCEA1P23193 301 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ELK4P28324 431 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CLDN18P56856 261 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ADORA2A-AS1P86434 159 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CHRNEQ04844 493 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CBFBQ13951 182 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 SF3B4Q15427 424 aaKnown RBP eCLIP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 MAPK14Q16539 360 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 NDUFAF6Q330K2 333 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ACSF3Q4G176 576 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 REP15Q6BDI9 236 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 TMEM211Q6ICI0 200 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CBLN3Q6UW01 205 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 B3GNT6Q6ZMB0 384 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 CPLX4Q7Z7G2 160 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 SNX32Q86XE0 403 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 MARVELD2Q8N4S9 558 aa10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF808Q8N4W9 903 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-209ENST00000552896 METTL25Q8N6Q8 603 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms