RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 A0A087WV62 115 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 IGLV3-32A0A0A0MS00 114 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 OR2M5A3KFT3 312 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TRIM64A6NGJ6 449 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF195O14628 629 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TMCC2O75069 709 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 COQ9O75208 318 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TGDSO95455 350 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 PSMG1O95456 288 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 LAMP1P11279 417 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 HK1P19367 917 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TBXA2RP21731 343 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TCEA1P23193 301 aaKnown RBP10.64□□□□□ -0.71
CKAP4-202ENST00000552828 GPC1P35052 558 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 CLDN20P56880 219 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 C21orf58P58505 322 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 HSPB3Q12988 150 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TMEM44Q2T9K0 475 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 SLC9B1Q4ZJI4 515 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF385BQ569K4 471 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 TMEM107Q6UX40 140 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 FAM214BQ7L5A3 538 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF551Q7Z340 670 aaPredicted RBP10.64□□□□□ -0.71
CKAP4-202ENST00000552828 RIMKLAQ8IXN7 391 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 METTL25Q8N6Q8 603 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF610Q8N9Z0 462 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 OR7A2PQ8NGA2 310 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 CEP70Q8NHQ1 597 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 FNDC9Q8TBE3 224 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 COQ8BQ96D53 544 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 ELP4Q96EB1 424 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 PERPQ96FX8 193 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 MAELQ96JY0 434 aaKnown RBP10.64□□□□□ -0.71
CKAP4-202ENST00000552828 PIGQQ9BRB3 760 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 PINK1Q9BXM7 581 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 RTN4RQ9BZR6 473 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 PLSCR4Q9NRQ2 329 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF701Q9NV72 531 aaPredicted RBP10.64□□□□□ -0.71
CKAP4-202ENST00000552828 FAM120CQ9NX05 1096 aaKnown RBP10.64□□□□□ -0.71
CKAP4-202ENST00000552828 MED11Q9P086 117 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 C19orf53Q9UNZ5 99 aaPredicted RBP10.64□□□□□ -0.71
CKAP4-202ENST00000552828 OR10H1Q9Y4A9 318 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 AP4B1Q9Y6B7 739 aa10.64□□□□□ -0.71
CKAP4-202ENST00000552828 A0A1W2PRB8 838 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 SMAD7O15105 426 aaKnown RBP10.63□□□□□ -0.71
CKAP4-202ENST00000552828 KLF4O43474 513 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 SCO2O43819 266 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 THBDP07204 575 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 IFI6P09912 130 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 FCGR2AP12318 317 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PPP3CBP16298 524 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 IL11P20809 199 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PCSK6P29122 969 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 FRKP42685 505 aaPredicted RBP10.63□□□□□ -0.71
CKAP4-202ENST00000552828 KCNJ5P48544 419 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PTH2RP49190 550 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 CLNS1AP54105 237 aaKnown RBP10.63□□□□□ -0.71
CKAP4-202ENST00000552828 SIRPAP78324 504 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 MLC1Q15049 377 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PON3Q15166 354 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PGS1Q32NB8 556 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 LSM12Q3MHD2 195 aaKnown RBP10.63□□□□□ -0.71
CKAP4-202ENST00000552828 RAET1LQ5VY80 246 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 EPGNQ6UW88 154 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PLEKHM3Q6ZWE6 761 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 ZNF550Q7Z398 422 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 MAVSQ7Z434 540 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 OR2L13Q8N349 312 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 DUSP19Q8WTR2 217 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 C1GALT1C1Q96EU7 318 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 DUSP26Q9BV47 211 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 BHLHE41Q9C0J9 482 aaPredicted RBP10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PTGES2Q9H7Z7 377 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 DDX18Q9NVP1 670 aaKnown RBP10.63□□□□□ -0.71
CKAP4-202ENST00000552828 AIG1Q9NVV5 245 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 FLRT3Q9NZU0 649 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 PROCRQ9UNN8 238 aa10.63□□□□□ -0.71
CKAP4-202ENST00000552828 ERICH4A6NGS2 130 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 INAFM1C9JVW0 142 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 UPK1AO00322 258 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 AQP8O94778 261 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 CNOT4O95628 575 aaKnown RBP10.62□□□□□ -0.71
CKAP4-202ENST00000552828 IL33O95760 270 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 ALDOCP09972 364 aaKnown RBP10.62□□□□□ -0.71
CKAP4-202ENST00000552828 IDO1P14902 403 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 EFNA1P20827 205 aaPredicted RBP10.62□□□□□ -0.71
CKAP4-202ENST00000552828 AQP5P55064 265 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 RPS3AP61247 264 aaKnown RBP10.62□□□□□ -0.71
CKAP4-202ENST00000552828 ZSCAN26Q16670 478 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 DECR1Q16698 335 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.62□□□□□ -0.71
CKAP4-202ENST00000552828 BEX5Q5H9J7 111 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 GGNQ86UU5 652 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 OR5M1Q8NGP8 315 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 SPATA3Q8NHX4 192 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 OR5P2Q8WZ92 322 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 OR52B2Q96RD2 323 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 TMEM204Q9BSN7 226 aa10.62□□□□□ -0.71
CKAP4-202ENST00000552828 C3orf14Q9HBI5 128 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms