RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 SH2D5Q6ZV89 423 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 ESPNLQ6ZVH7 1005 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 PLEKHM3Q6ZWE6 761 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 ZNF551Q7Z340 670 aaPredicted RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 IFT20Q8IY31 132 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 OR4C3Q8NH37 302 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 OR10D3Q8NH80 312 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 CEP70Q8NHQ1 597 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 ZFP28Q8NHY6 868 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 GPR151Q8TDV0 419 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 PIK3R3Q92569 461 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 ZBED6CLQ96FA7 236 aaPredicted RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 ZC3HAV1LQ96H79 300 aaKnown RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 EGLN2Q96KS0 407 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 MS4A4EQ96PG1 132 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 CCT7Q99832 543 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 PRRG4Q9BZD6 226 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 KLHL4Q9C0H6 718 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 CXorf56Q9H5V9 222 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 ZNF701Q9NV72 531 aaPredicted RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 NTMQ9P121 344 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 EMCNQ9ULC0 261 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 MCTS1Q9ULC4 181 aaKnown RBP6.82□□□□□ -1.32
NEK3-201ENST00000550331 VDAC3Q9Y277 283 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 CCL27Q9Y4X3 112 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 HEATR5AQ86XA9 2040 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 ANK2Q01484 3957 aa6.82□□□□□ -1.32
NEK3-201ENST00000550331 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 A0A1W2PQD3 144 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 A0A1W2PRB8 838 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 TRIM64A6NGJ6 449 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 TRIM64BA6NI03 449 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 PDPK1O15530 556 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 RGS14O43566 566 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 GMFGO60234 142 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 SEC22BO75396 215 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 SYNGR4O95473 234 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 CNOT4O95628 575 aaKnown RBP6.81□□□□□ -1.32
NEK3-201ENST00000550331 HSPA4LO95757 839 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 PABPC4LP0CB38 370 aaKnown RBP6.81□□□□□ -1.32
NEK3-201ENST00000550331 NEFHP12036 1026 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 HPGDP15428 266 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 DDX5P17844 614 aaKnown RBP6.81□□□□□ -1.32
NEK3-201ENST00000550331 PSMB1P20618 241 aaKnown RBP6.81□□□□□ -1.32
NEK3-201ENST00000550331 ME2P23368 584 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 ELK4P28324 431 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 SERPINB4P48594 390 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 CCT5P48643 541 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 ZNF41P51814 821 aaPredicted RBP6.81□□□□□ -1.32
NEK3-201ENST00000550331 PDE7AQ13946 482 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 EXOC3L2Q2M3D2 409 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 CFAP157Q5JU67 520 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 ANKRD34AQ69YU3 496 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 MFSD12Q6NUT3 480 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 ZNF704Q6ZNC4 412 aaPredicted RBP6.81□□□□□ -1.32
NEK3-201ENST00000550331 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 STK32CQ86UX6 486 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 EXOC3L1Q86VI1 746 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 PHC2Q8IXK0 858 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 ZNF611Q8N823 705 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 OR6Y1Q8NGX8 325 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 OR2V1Q8NHB1 315 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 FAM110BQ8TC76 370 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 TMEM171Q8WVE6 324 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 PPCDCQ96CD2 204 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 MTERF3Q96E29 417 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 GIMAP5Q96F15 307 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 FCRL1Q96LA6 429 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 RNF145Q96MT1 663 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 TMEM204Q9BSN7 226 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 TXLNGYQ9BZA5 131 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 ACTR6Q9GZN1 396 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 REEP4Q9H6H4 257 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 LRTM1Q9HBL6 345 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 GP6Q9HCN6 339 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 TNFRSF12AQ9NP84 129 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 EQTNQ9NQ60 294 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 UBQLN4Q9NRR5 601 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 ACSS1Q9NUB1 689 aaPredicted RBP6.81□□□□□ -1.32
NEK3-201ENST00000550331 MED17Q9NVC6 651 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 OXSMQ9NWU1 459 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 C1orf109Q9NX04 203 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 TBK1Q9UHD2 729 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 GPR52Q9Y2T5 361 aa6.81□□□□□ -1.32
NEK3-201ENST00000550331 A0A1W2PPM1 405 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 SCDO00767 359 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 TNFSF11O14788 317 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 HS3ST1O14792 307 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 GSC2O15499 205 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 CXCL13O43927 109 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 PLIN3O60664 434 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 CRLF1O75462 422 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 KCNK2O95069 426 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 TUBBP07437 444 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 ALOX5P09917 674 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 LINGO3P0C6S8 592 aa6.8□□□□□ -1.32
NEK3-201ENST00000550331 ACP2P11117 423 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms