RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PCDHAC1Q9H158 963 aa19.31■□□□□ 0.68
VPS29-206ENST00000549578 DSN1Q9H410 356 aa19.31■□□□□ 0.68
VPS29-206ENST00000549578 ZNF232Q9UNY5 417 aa19.31■□□□□ 0.68
VPS29-206ENST00000549578 SLC35A3Q9Y2D2 325 aa19.31■□□□□ 0.68
VPS29-206ENST00000549578 CHST2Q9Y4C5 530 aa19.31■□□□□ 0.68
VPS29-206ENST00000549578 ZNF264O43296 627 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 TPST1O60507 370 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 DNAJC8O75937 253 aaPredicted RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 ZNF24P17028 368 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 PGM1P36871 562 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 ADH7P40394 386 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 SPATS1Q496A3 300 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 GLIPR1L2Q4G1C9 344 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 PRR30Q53SZ7 412 aaPredicted RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 CLIP4Q8N3C7 705 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 TMEM251Q8N6I4 163 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 TMCO5AQ8N6Q1 288 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 FADS6Q8N9I5 356 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 OR2M3Q8NG83 312 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 OR4K17Q8NGC6 315 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 CADM1Q9BY67 442 aaKnown RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 LRMDAQ9H2I8 198 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 ZNF703Q9H7S9 590 aaPredicted RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 NTNG1Q9Y2I2 539 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 C15orf41Q9Y2V0 281 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 NCKAP5O14513 1909 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 IGLV3-32A0A0A0MS00 114 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 CDHR4A6H8M9 788 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 GSC2O15499 205 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 PRKAR1BP31321 381 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 PPIAP62937 165 aaKnown RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 SKP2Q13309 424 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 FXNQ16595 210 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 RNF220Q5VTB9 566 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 GLYATQ6IB77 296 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 COMTD1Q86VU5 262 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 CMIPQ8IY22 773 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 FAM71CQ8NEG0 241 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 B4GALNT2Q8NHY0 566 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 SLC26A7Q8TE54 656 aa19.3■□□□□ 0.68
VPS29-206ENST00000549578 CCDC124Q96CT7 223 aaKnown RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 TSPAN10Q9H1Z9 355 aaPredicted RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 DNAJB12Q9NXW2 375 aaKnown RBP19.3■□□□□ 0.68
VPS29-206ENST00000549578 PCNX3Q9H6A9 2034 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 ACOT7O00154 380 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 EPPINO95925 133 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 ENDOUP21128 410 aaKnown RBP19.29■□□□□ 0.68
VPS29-206ENST00000549578 ME2P23368 584 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 GDF1P27539 372 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 MAGEA5P43359 124 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 CCR4P51679 360 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 DUSP7Q16829 419 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 HYAL4Q2M3T9 481 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 DHRS4L2Q6PKH6 230 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 FAM180AQ6UWF9 173 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 SLC22A16Q86VW1 577 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 FAM162AQ96A26 154 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 UBQLN3Q9H347 655 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 B4GALT7Q9UBV7 327 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 ANAPC2Q9UJX6 822 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 ICAM5Q9UMF0 924 aa19.29■□□□□ 0.68
VPS29-206ENST00000549578 SMG1Q96Q15 3661 aaKnown RBP19.28■□□□□ 0.68
VPS29-206ENST00000549578 TTLL8A6PVC2 850 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 TFECO14948 347 aaPredicted RBP19.28■□□□□ 0.68
VPS29-206ENST00000549578 ARPC2O15144 300 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 EIF4E2O60573 245 aaKnown RBP19.28■□□□□ 0.68
VPS29-206ENST00000549578 CBR3O75828 277 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 CELA3AP09093 270 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 CD247P20963 164 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 TOMM20Q15388 145 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 CYBRD1Q53TN4 286 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 GPR32P1Q8NGA4 272 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 MCUR1Q96AQ8 359 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 SNRNP40Q96DI7 357 aaKnown RBP19.28■□□□□ 0.68
VPS29-206ENST00000549578 PINK1Q9BXM7 581 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 LAT2Q9GZY6 243 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 MAGEL2Q9UJ55 1249 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 RALYQ9UKM9 306 aaKnown RBP19.28■□□□□ 0.68
VPS29-206ENST00000549578 SNX13Q9Y5W8 968 aa19.28■□□□□ 0.68
VPS29-206ENST00000549578 FRS3O43559 492 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 CDC40O60508 579 aaKnown RBP eCLIP19.27■□□□□ 0.68
VPS29-206ENST00000549578 ADAM11O75078 769 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 GMNNO75496 209 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 WISP2O76076 250 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 CRYABP02511 175 aaKnown RBP19.27■□□□□ 0.68
VPS29-206ENST00000549578 PRB1P04280 392 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 TCEA1P23193 301 aaKnown RBP19.27■□□□□ 0.68
VPS29-206ENST00000549578 P2RX1P51575 399 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 ALDH6A1Q02252 535 aaKnown RBP19.27■□□□□ 0.68
VPS29-206ENST00000549578 BNIP2Q12982 314 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 EIPR1Q53HC9 387 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 PGM2L1Q6PCE3 622 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 ASRGL1Q7L266 308 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 FAM109AQ8N4B1 249 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 OR10Q1Q8NGQ4 319 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 PTGES2Q9H7Z7 377 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 HHATLQ9HCP6 504 aa19.27■□□□□ 0.68
VPS29-206ENST00000549578 HEATR5AQ86XA9 2040 aa19.27■□□□□ 0.67
VPS29-206ENST00000549578 TMEM229AB2RXF0 380 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 TRAPPC6AO75865 159 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms