RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 NUDT8Q8WV74 236 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 ZFAND2BQ8WV99 257 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 SDF2Q99470 211 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 DPH7Q9BTV6 452 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 FOXQ1Q9C009 403 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 TRIM2Q9C040 744 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 ABCB9Q9NP78 766 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 NDUFAF4Q9P032 175 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 RRP15Q9Y3B9 282 aaKnown RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 LYVE1Q9Y5Y7 322 aa4.47□□□□□ -1.69
SCAF11-212ENST00000549162 CHCHD2Q9Y6H1 151 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-212ENST00000549162 HMX3A6NHT5 357 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 KPNA3O00505 521 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 BHLHE40O14503 412 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SIGLEC6O43699 453 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 NME2P1O60361 137 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 CNOT3O75175 753 aaKnown RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SEC14L2O76054 403 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ACTL6AO96019 429 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 EIF2S1P05198 315 aaKnown RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SFTPCP11686 197 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ANPEPP15144 967 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ALAS2P22557 587 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 DCKP27707 260 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 GKP32189 559 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 EVI2BP34910 448 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ATP6V1E1P36543 226 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 VHLP40337 213 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SSR1P43307 286 aaKnown RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 HLCSP50747 726 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 UFM1P61960 85 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 TBCEQ15813 527 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 VPS26BQ4G0F5 336 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SYT6Q5T7P8 510 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF468Q5VIY5 522 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 PPP1R32Q7Z5V6 425 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ALYREFQ86V81 257 aaKnown RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 TMEM151BQ8IW70 566 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ZFP62Q8NB50 900 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 GNPDA2Q8TDQ7 276 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SPSB4Q96A44 273 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 KIAA1143Q96AT1 154 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SFXN2Q96NB2 322 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 PTDSS2Q9BVG9 487 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 MRPL13Q9BYD1 178 aaKnown RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 TBK1Q9UHD2 729 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 FAF1Q9UNN5 650 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF443Q9Y2A4 671 aaPredicted RBP4.46□□□□□ -1.69
SCAF11-212ENST00000549162 B3GNT3Q9Y2A9 372 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 HDGFL3Q9Y3E1 203 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 L3MBTL1Q9Y468 752 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 CDH10Q9Y6N8 788 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 SPACA6W5XKT8 324 aa4.46□□□□□ -1.69
SCAF11-212ENST00000549162 CHD3Q12873 2000 aaKnown RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 LDOC1O95751 146 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 SMIM18P0DKX4 95 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 GGT2P36268 569 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 GSK3AP49840 483 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 MALLQ13021 153 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 MFAP5Q13361 173 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 NCF4Q15080 339 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 SSX2Q16385 188 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 XKR6Q5GH73 641 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 UNQ6494/PRO21346Q6UXR6 183 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 CSNK1A1LQ8N752 337 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 OR5L2Q8NGL0 311 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 OR52N1Q8NH53 320 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 OR14C36Q8NHC7 312 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 RNF141Q8WVD5 230 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 PSMF1Q92530 271 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 RAB24Q969Q5 203 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 ZFYVE19Q96K21 471 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 UTP23Q9BRU9 249 aaKnown RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 ASPNQ9BXN1 380 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 TLNRD1Q9H1K6 362 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM9BQ9NQ34 198 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 DDX28Q9NUL7 540 aaKnown RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 B3GNT2Q9NY97 397 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 FRRS1LQ9P0K9 344 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 CHRNA9Q9UGM1 479 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 BTBD3Q9Y2F9 522 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 H3BUI4 141 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 PHYHO14832 338 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 SEMA7AO75326 666 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 SLC4A1P02730 911 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 ENGP17813 658 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 ATP6V1B2P21281 511 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 CFL1P23528 166 aaKnown RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 CCR9P51686 369 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 HBA1P69905 142 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 DCDP81605 110 aaKnown RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 CYBRD1Q53TN4 286 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 ADAM5Q6NVV9 412 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 TMPRSS9Q7Z410 1059 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 LILRB1Q8NHL6 650 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 CDS1Q92903 461 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 GFM2Q969S9 779 aaKnown RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 TAMM41Q96BW9 452 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms