RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 KLHL15Q96M94 604 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 CCL19Q99731 98 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 KLHL4Q9C0H6 718 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 CXorf36Q9H7Y0 433 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 PLSCR4Q9NRQ2 329 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 GPATCH2Q9NW75 528 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 GIN1Q9NXP7 522 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 SNX8Q9Y5X2 465 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 FN1P02751 2386 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 ABCA2Q9BZC7 2435 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 FREM1Q5H8C1 2179 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 NPIPA5A0A0B4J1W7 369 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 NPIPA7E9PJI5 369 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 SMPD2O60906 423 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 SKAP2O75563 359 aaPredicted RBP15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 SYNGR4O95473 234 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 INHBBP09529 407 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 NPIPA8P0DM63 369 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 ME2P23368 584 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 ELK4P28324 431 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 AGTR1P30556 359 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 SERPINB5P36952 375 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 RNF144AP50876 292 aaPredicted RBP15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 CTBP2P56545 445 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 TP53BP2Q13625 1128 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 ZNF239Q16600 458 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 ATP6AP1LQ52LC2 224 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 C6orf136Q5SQH8 315 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 HBMQ6B0K9 141 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 CBLN3Q6UW01 205 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 C20orf204Q6ZNR8 217 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 KRTCAP2Q8N6L1 136 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 OR56A1Q8NGH5 318 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 PPP1R14CQ8TAE6 165 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 RNF128Q8TEB7 428 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 OR5P2Q8WZ92 322 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 PIGTQ969N2 578 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 CHMP6Q96FZ7 201 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 GLRX2Q9NS18 164 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 TLN2Q9Y4G6 2542 aa15.55■□□□□ 0.08
CHMP1A-205ENST00000548650 UQCRHLA0A096LP55 91 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 NPIPB9F8W1W9 429 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 SLU7O95391 586 aaKnown RBP15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 C6orf47O95873 294 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 PPP3CBP16298 524 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 FPR1P21462 350 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 VSNL1P62760 191 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 DCST2Q5T1A1 773 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 MTERF4Q7Z6M4 381 aaKnown RBP15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 LILRA2Q8N149 483 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 FNDC5Q8NAU1 212 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 SFXN5Q8TD22 340 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 ACTRT3Q9BYD9 372 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 ATAD3AQ9NVI7 634 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 ZDHHC2Q9UIJ5 367 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 ICAM5Q9UMF0 924 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 KCNE3Q9Y6H6 103 aa15.54■□□□□ 0.08
CHMP1A-205ENST00000548650 ARHGEF9O43307 516 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 EFNA2O43921 213 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 LYPLA1O75608 230 aaPredicted RBP15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 TUBBP07437 444 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 CREB1P16220 341 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 ATP6V1C1P21283 382 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 SFTPDP35247 375 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 EIF1P41567 113 aaKnown RBP15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 CCT3P49368 545 aaKnown RBP15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 SUMO3P55854 103 aaPredicted RBP15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 NDUFAF6Q330K2 333 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 KLHL26Q53HC5 615 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 BEX5Q5H9J7 111 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 IL23RQ5VWK5 629 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 P3H2Q8IVL5 708 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 RIMKLAQ8IXN7 391 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 ZNF527Q8NB42 609 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 PHOSPHO1Q8TCT1 267 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 ABHD3Q8WU67 409 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 IGFBPL1Q8WX77 278 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 COQ8BQ96D53 544 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 COX4I2Q96KJ9 171 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 SRXN1Q9BYN0 137 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 COQ10BQ9H8M1 238 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 ACTL7BQ9Y614 415 aa15.53■□□□□ 0.08
CHMP1A-205ENST00000548650 KLF4O43474 513 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 TYROBPO43914 113 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 BPGMP07738 259 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 KRT16P08779 473 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 ADSLP30566 484 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 ETV4P43268 484 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 P2RX1P51575 399 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 C21orf58P58505 322 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 LTBQ06643 244 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 ZNF844Q08AG5 666 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 IFFO1Q0D2I5 559 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 TOMM34Q15785 309 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 SPDYE7PQ495Y7 208 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 PDSS1Q5T2R2 415 aa15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 Q71RC1 249 aaPredicted RBP15.52■□□□□ 0.08
CHMP1A-205ENST00000548650 NATD1Q8N6N6 113 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms