RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ICAM5Q9UMF0 924 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 TRIM33Q9UPN9 1127 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 LIPT1Q9Y234 373 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 PCDHB14Q9Y5E9 798 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 CACNA1CQ13936 2221 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 ARHGAP21Q5T5U3 1957 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 NBPF19A0A087WUL8 3843 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 SERINC4A6NH21 518 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 CD8B2A6NJW9 211 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 FAM47E-STBD1D6RA91 191 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 KIAA0513O60268 411 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 H6PDO95479 791 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 VIMP08670 466 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 PEPDP12955 493 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 POU3F2P20265 443 aaPredicted RBP16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 TIMP3P35625 211 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF41P51814 821 aaPredicted RBP16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 CHRNEQ04844 493 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 MAPK14Q16539 360 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 SYPL1Q16563 259 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 PLPPR5Q32ZL2 321 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF619Q8N2I2 560 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 ANKFN1Q8N957 763 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 TNIP2Q8NFZ5 429 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 ZG16BQ96DA0 208 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 TRNT1Q96Q11 434 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 NPAS1Q99742 590 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 TMEM120AQ9BXJ8 343 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 UCK2Q9BZX2 261 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 CALHM2Q9HA72 323 aa16.92■□□□□ 0.3
PRPF40B-206ENST00000547764 KIAA1549Q9HCM3 1950 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 A0A096LPI6 279 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 H3BML4 177 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF264O43296 627 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 TROVE2P10155 538 aaKnown RBP eCLIP16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 UBL4AP11441 157 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 ETFAP13804 333 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 HOXB9P17482 250 aaPredicted RBP16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 CEACAM8P31997 349 aaPredicted RBP16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 MDH1P40925 334 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 CRATP43155 626 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 MAGEA8P43361 318 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 P2RX1P51575 399 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 CLDN15P56746 228 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 HPCAP84074 193 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 PAGE3Q5JUK9 113 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 METTL21CQ5VZV1 264 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF787Q6DD87 383 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 CGB2Q6NT52 195 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 ADGRE4PQ86SQ3 457 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 LIX1LQ8IVB5 337 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 UBQLNLQ8IYU4 475 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 GTPBP8Q8N3Z3 284 aaPredicted RBP16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 NAXEQ8NCW5 288 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 ZBTB8AQ96BR9 441 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 CHST11Q9NPF2 352 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 SLAMF8Q9P0V8 285 aa16.91■□□□□ 0.3
PRPF40B-206ENST00000547764 C7orf72A4D263 438 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 NKX2-6A6NCS4 301 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 MBD3L4A6NDZ8 208 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 MBD3L3A6NE82 208 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 MBD3L5A6NJ08 208 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 FAM90A27PA6NNH2 459 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 CLCA1A8K7I4 914 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 HSPB2A8KAH6 182 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 CYSRT1A8MQ03 144 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 H0YC42 278 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 C19orf84I3L1E1 186 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 EIF4E2O60573 245 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 NUDT14O95848 222 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 IL2RAP01589 272 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 CHRM4P08173 479 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 LINGO3P0C6S8 592 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 NR2F1P10589 423 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF17P17021 662 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 PSMA4P25789 261 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 SUCLG1P53597 346 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 TPD52P55327 224 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 SUMO3P55854 103 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 HSPB2Q16082 182 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 LRIF1Q5T3J3 769 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 PLXDC2Q6UX71 529 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 LRRC74BQ6ZQY2 392 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 HMGN2P46Q86SG4 172 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 MEIOBQ8N635 442 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 MBD3L2Q8NHZ7 208 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 POC1BQ8TC44 478 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 OIT3Q8WWZ8 545 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 UCN2Q96RP3 112 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 QRSL1Q9H0R6 528 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 SLC38A1Q9H2H9 487 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 SLC25A37Q9NYZ2 338 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 L3MBTL1Q9Y468 752 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 AP4B1Q9Y6B7 739 aa16.9■□□□□ 0.3
PRPF40B-206ENST00000547764 A0A1W2PP18 115 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 CLIC1O00299 241 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 SEC14L5O43304 696 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 CSTAP01040 98 aa16.89■□□□□ 0.29
PRPF40B-206ENST00000547764 ARFIP2P53365 341 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms