RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CNOT11Q9UKZ1 510 aaKnown RBP14.49□□□□□ -0.09
TRAFD1-203ENST00000547063 CHST2Q9Y4C5 530 aa14.49□□□□□ -0.09
TRAFD1-203ENST00000547063 PCDHGB7Q9Y5F8 929 aa14.49□□□□□ -0.09
TRAFD1-203ENST00000547063 H3BNX3 289 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 MKRN2OSH3BPM6 223 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 hCG_2039718K7EN88 272 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 M0R3H8 397 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 FAAHO00519 579 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 GNGT2O14610 69 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 ADAMDEC1O15204 470 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 DPM1O60762 260 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 CYP7B1O75881 506 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 CST1P01037 141 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 LDLRP01130 860 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 TNFRSF1BP20333 461 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 P2RX1P51575 399 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 SMIM11AP58511 58 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 COPZ1P61923 177 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 ARG2P78540 354 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 SKP2Q13309 424 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 RAPSNQ13702 412 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 GK3PQ14409 553 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 OR1C1Q15619 314 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 IGFL2Q6UWQ7 119 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 DEF8Q6ZN54 512 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 TMCO5AQ8N6Q1 288 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 GATSQ8NAP1 163 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 OR6T1Q8NGN1 323 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 B4GALNT2Q8NHY0 566 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 FRMD6Q96NE9 622 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 SMAD5Q99717 465 aaKnown RBP14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 BDH2Q9BUT1 245 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 RSPO3Q9BXY4 272 aaPredicted RBP14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 TRIM2Q9C040 744 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 AMBRA1Q9C0C7 1298 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 RASSF4Q9H2L5 321 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 RNPEPL1Q9HAU8 725 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 ANKRD10Q9NXR5 420 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 NDUFAF4Q9P032 175 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 C6orf203Q9P0P8 240 aaPredicted RBP14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 STX18Q9P2W9 335 aaKnown RBP14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 DNAJB9Q9UBS3 223 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 CARD8Q9Y2G2 431 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 NCOR2Q9Y618 2525 aa14.48□□□□□ -0.09
TRAFD1-203ENST00000547063 IGLV3-32A0A0A0MS00 114 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 H0Y3Z8 333 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 CLOCKO15516 846 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 TIPRLO75663 272 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 SLC25A12O75746 678 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 ITGB2P05107 769 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 LINGO3P0C6S8 592 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 CCL3P10147 92 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 CD46P15529 392 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 PGCP20142 388 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 MASP1P48740 699 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 ZNF136P52737 540 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 GAS1P54826 345 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 ZNF117Q03924 483 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 EPS8Q12929 822 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 CBFBQ13951 182 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 ATP6AP1Q15904 470 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 OR2T5Q6IEZ7 315 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 PQLC1Q8N2U9 271 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 OR2T29Q8NH02 315 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 DUSP19Q8WTR2 217 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 TMEM41AQ96HV5 264 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 PRRC1Q96M27 445 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 C5orf34Q96MH7 638 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 MCHR1Q99705 422 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 PIP5K1AQ99755 562 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 PTGES2Q9H7Z7 377 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 TMEM27Q9HBJ8 222 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 AGPAT4Q9NRZ5 378 aa14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 KLF13Q9Y2Y9 288 aaPredicted RBP14.47□□□□□ -0.09
TRAFD1-203ENST00000547063 WDFY3Q8IZQ1 3526 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 NEURL1O76050 574 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ATP6V1G2O95670 118 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 BAG2O95816 211 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 THRBP10828 461 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ANPEPP15144 967 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 CNR1P21554 472 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ELAVL4P26378 380 aaKnown RBP14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ITPKBP27987 946 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 PTGDSP41222 190 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 CCR4P51679 360 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 PRAMEF20Q5VT98 475 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ZNF613Q6PF04 617 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 IGFL3Q6UXB1 125 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 PLEKHM3Q6ZWE6 761 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 MDGA2Q7Z553 956 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 COMTD1Q86VU5 262 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 LACC1Q8IV20 430 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ZADH2Q8N4Q0 377 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 LSMEM1Q8N8F7 131 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 KDF1Q8NAX2 398 aaPredicted RBP14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 TMEM178AQ8NBL3 297 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 OR5W2Q8NH69 310 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ARSGQ96EG1 525 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 CENPNQ96H22 339 aaPredicted RBP14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 FAM173AQ9BQD7 235 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms