RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ARF3P61204 181 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 SIM1P81133 766 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ADAM15Q13444 863 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 GPR18Q14330 331 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 QPRTQ15274 297 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ZNHIT3Q15649 155 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 TAB1Q15750 504 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ISXQ2M1V0 245 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 CCDC92Q53HC0 331 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 PYDC2Q56P42 97 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ZMAT1Q5H9K5 638 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 VASNQ6EMK4 673 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 RTL4Q6ZR62 310 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ABI3BPQ7Z7G0 1075 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 CDH24Q86UP0 819 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 LHFPL3Q86UP9 236 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MARCH9Q86YJ5 346 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 LIX1LQ8IVB5 337 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 CACTIN-AS1Q8N1I8 211 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 Q8N402 240 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ENKURQ8TC29 256 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 SPRYD4Q8WW59 207 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MRPL48Q96GC5 212 aaKnown RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MRGPRX1Q96LB2 322 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ALG8Q9BVK2 526 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 C6orf106Q9H6K1 298 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 FOLH1BQ9HBA9 442 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 TIGARQ9NQ88 270 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 NOX1Q9Y5S8 564 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 CENPXA8MT69 81 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 C12orf71A8MTZ7 269 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 B4DXG7 233 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 PRR23D1E9PI22 279 aaPredicted RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 LALBAP00709 142 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 PRR23D2P0DMB1 279 aaPredicted RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 PEPDP12955 493 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 IFI30P13284 250 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 HTR2AP28223 471 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 PTGER1P34995 402 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 MAP2K3P46734 347 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 FXYD6P3P58550 94 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 MGAT2Q10469 447 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 BIKQ13323 160 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 SF3A2Q15428 464 aaKnown RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 GPR68Q15743 365 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 ALG11Q2TAA5 492 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 ZFP69Q49AA0 526 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 ATAD3CQ5T2N8 411 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 TMEM53Q6P2H8 277 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 CNIH2Q6PI25 160 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 PLET1Q6UQ28 207 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 OOSP2Q86WS3 158 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 SIRT6Q8N6T7 355 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 POMGNT2Q8NAT1 580 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 SLC7A6Q92536 515 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 KISS1RQ969F8 398 aaPredicted RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 ST6GAL2Q96JF0 529 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 TMEM168Q9H0V1 697 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 C11orf54Q9H0W9 315 aaPredicted RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 ADAP2Q9NPF8 381 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 TOR4AQ9NXH8 423 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 SERTAD3Q9UJW9 196 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 YBX2Q9Y2T7 364 aaKnown RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 YARS2Q9Y2Z4 477 aaKnown RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 NPFFR2Q9Y5X5 522 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 CSNK1G3Q9Y6M4 447 aa11.55□□□□□ -0.56
PAAF1-215ENST00000544909 MKI67P46013 3256 aaKnown RBP11.55□□□□□ -0.56
PAAF1-215ENST00000544909 OR6C74A6NCV1 312 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 IDH3BO43837 385 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 FGF17O60258 216 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 PIP5K1CO60331 668 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 PTP4A3O75365 173 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 SC5DO75845 299 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 SERPINA3P01011 423 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 IGLV3-19P01714 112 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 CLEC2LP0C7M8 214 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 COL9A1P20849 921 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 SLC2A5P22732 501 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 MYL9P24844 172 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 RBMS1P29558 406 aaKnown RBP11.54□□□□□ -0.56
PAAF1-215ENST00000544909 SLC6A6P31641 620 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 SOX9P48436 509 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 RAB25P57735 213 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 ACTA2P62736 377 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 ACTG2P63267 376 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 MAPK14Q16539 360 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 TRMT12Q53H54 448 aaKnown RBP11.54□□□□□ -0.56
PAAF1-215ENST00000544909 COL13A1Q5TAT6 717 aaPredicted RBP11.54□□□□□ -0.56
PAAF1-215ENST00000544909 ZNF550Q7Z398 422 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 HMGN2P46Q86SG4 172 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 GALNT12Q8IXK2 581 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 TCTE3Q8IZS6 198 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 SYS1Q8N2H4 156 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 CSNK1A1LQ8N752 337 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 SYT14Q8NB59 555 aa11.54□□□□□ -0.56
PAAF1-215ENST00000544909 OR5M3Q8NGP4 307 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms