RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ARL8BQ9NVJ2 186 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 TINAGQ9UJW2 476 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 VDAC3Q9Y277 283 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 RPH3AQ9Y2J0 694 aaPredicted RBP13.69□□□□□ -0.22
CD9-210ENST00000543916 SVILO95425 2214 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 RELNP78509 3460 aa13.69□□□□□ -0.22
CD9-210ENST00000543916 C15orf38-AP3S2A0A0A6YYH1 394 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 OR14I1A6ND48 311 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 SHISA8B8ZZ34 492 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 C5orf58C9J3I9 102 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 EIF4E2O60573 245 aaKnown RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 PGM3O95394 542 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 DBIP07108 87 aaKnown RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 TPOP07202 933 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 UBTFL6P0CB48 400 aaPredicted RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 BMP7P18075 431 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 SLC6A2P23975 617 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 PGM1P36871 562 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 NUDT2P50583 147 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 P2RX1P51575 399 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 SCARB2Q14108 478 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 GNA13Q14344 377 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 CYP51A1Q16850 503 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 NHSL2Q5HYW2 709 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 EMC4Q5J8M3 183 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 FAM91A1Q658Y4 838 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 REEP3Q6NUK4 255 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 C8orf82Q6P1X6 216 aaPredicted RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 EIF3MQ7L2H7 374 aaKnown RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 CD163Q86VB7 1156 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 IFNEQ86WN2 208 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 CALHM3Q86XJ0 350 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 ZZZ3Q8IYH5 903 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 FITM2Q8N6M3 262 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 TMCO5AQ8N6Q1 288 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 METTL25Q8N6Q8 603 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 FAM71CQ8NEG0 241 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 OR5M9Q8NGP3 310 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 OR5M1Q8NGP8 315 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 OR10A6Q8NH74 314 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 BBS10Q8TAM1 723 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 CNOT9Q92600 299 aaKnown RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 ZNF524Q96C55 264 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 DTNBP1Q96EV8 351 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 GPATCH1Q9BRR8 931 aaKnown RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 UGT2B28Q9BY64 529 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 PIF1Q9H611 641 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 EFCAB1Q9HAE3 211 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.68□□□□□ -0.22
CD9-210ENST00000543916 PNPLA3Q9NST1 481 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 SLC35A3Q9Y2D2 325 aa13.68□□□□□ -0.22
CD9-210ENST00000543916 FLNCQ14315 2725 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 TRGV8A0A0C4DH27 118 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 NDUFAB1O14561 156 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 CYP7B1O75881 506 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 NID1P14543 1247 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 IL7RP16871 459 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 CA7P43166 264 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 CPA2P48052 419 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 ZNF41P51814 821 aaPredicted RBP13.67□□□□□ -0.22
CD9-210ENST00000543916 SUMO3P55854 103 aaPredicted RBP13.67□□□□□ -0.22
CD9-210ENST00000543916 KCNJ10P78508 379 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 SRSF1Q07955 248 aaKnown RBP eCLIP13.67□□□□□ -0.22
CD9-210ENST00000543916 TOMM34Q15785 309 aaPredicted RBP13.67□□□□□ -0.22
CD9-210ENST00000543916 TMEM44Q2T9K0 475 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 PLPPR5Q32ZL2 321 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 MRPL2Q5T653 305 aaKnown RBP13.67□□□□□ -0.22
CD9-210ENST00000543916 RAET1LQ5VY80 246 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 VASNQ6EMK4 673 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 ZNF836Q6ZNA1 936 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 SERPINA11Q86U17 422 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 DOLPP1Q86YN1 238 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 C11orf65Q8NCR3 313 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 OR52P1PQ8NH57 321 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 BCAS4Q8TDM0 211 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 GPR119Q8TDV5 335 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 SARAFQ96BY9 339 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 SFXN2Q96NB2 322 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 TIMP4Q99727 224 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 SH3GL1Q99961 368 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 RSPO3Q9BXY4 272 aaPredicted RBP13.67□□□□□ -0.22
CD9-210ENST00000543916 LAT2Q9GZY6 243 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 MED17Q9NVC6 651 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 DNAJB12Q9NXW2 375 aaKnown RBP13.67□□□□□ -0.22
CD9-210ENST00000543916 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
CD9-210ENST00000543916 ZNF443Q9Y2A4 671 aaPredicted RBP13.67□□□□□ -0.22
CD9-210ENST00000543916 GTF3C1Q12789 2109 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 A0A087WZY1 265 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 OR2M5A3KFT3 312 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 PRRG2O14669 202 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 BCKDKO14874 412 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 ADAM11O75078 769 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 SEMA7AO75326 666 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 GCM2O75603 506 aaPredicted RBP13.66□□□□□ -0.22
CD9-210ENST00000543916 NUDT14O95848 222 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 ACTL6AO96019 429 aa13.66□□□□□ -0.22
CD9-210ENST00000543916 THBS1P07996 1170 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms