RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 LCP2Q13094 533 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 P2RY6Q15077 328 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 NRF1Q16656 503 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 FCRLAQ7L513 359 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 TDRPQ86YL5 185 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 FBXO30Q8TB52 745 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 L3HYPDHQ96EM0 354 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 EGLN2Q96KS0 407 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 TNFRSF13CQ96RJ3 184 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 COQ10BQ9H8M1 238 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 GP6Q9HCN6 339 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 HHATLQ9HCP6 504 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 TMEM160Q9NX00 188 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 NPAP1Q9NZP6 1156 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 ZNF180Q9UJW8 692 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 ING1Q9UK53 422 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 PYCARDQ9ULZ3 195 aa15.78■□□□□ 0.12
CLSTN3-214ENST00000542663 POC1B-GALNT4F8VUJ3 575 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 UBFD1O14562 309 aaKnown RBP15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 LYZL6O75951 148 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 YES1P07947 543 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 TAC1P20366 129 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 EDNRAP25101 427 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 ELK4P28324 431 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 CDH11P55287 796 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 VLDLRP98155 873 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 C11orf71Q6IPW1 123 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 Q6ZT83 130 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 ZNF572Q7Z3I7 529 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 CDRT4Q8N9R6 151 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 SLC16A11Q8NCK7 471 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 B4GALNT2Q8NHY0 566 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 REXO5Q96IC2 774 aaKnown RBP15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 GSTO2Q9H4Y5 243 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 FAIMQ9NVQ4 179 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 PRSS50Q9UI38 385 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 STK38LQ9Y2H1 464 aa15.77■□□□□ 0.12
CLSTN3-214ENST00000542663 ARFGEF3Q5TH69 2177 aa15.77■□□□□ 0.11
CLSTN3-214ENST00000542663 GOLGA8QA0A0J9YX86 632 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 A0A1W2PQD3 144 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 GOLGA8OA6NCC3 632 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 ELOA3DA6NLF2 546 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 GOLGA8NF8WBI6 632 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 GOLGA8RI6L899 631 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 PRKD3O94806 890 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 FESP07332 822 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 NUDT6P53370 316 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 PRKAA2P54646 552 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 ZNF117Q03924 483 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 LOXL1Q08397 574 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 PPA1Q15181 289 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 DUSP5Q16690 384 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 ELOA3BQ3SY89 546 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 VPS26BQ4G0F5 336 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 ZNF385BQ569K4 471 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 EXOSC6Q5RKV6 272 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 ANKRD26P1Q6NSI1 321 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 IKBIPQ70UQ0 350 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 MMGT1Q8N4V1 131 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 ELOA3Q8NG57 546 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 OR6Y1Q8NGX8 325 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 CIDECQ96AQ7 238 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 KCNK17Q96T54 332 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 USB1Q9BQ65 265 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 CACNG6Q9BXT2 260 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 CXorf36Q9H7Y0 433 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 BCO1Q9HAY6 547 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 UBQLN4Q9NRR5 601 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 NTMQ9P121 344 aa15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 WBP11Q9Y2W2 641 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-214ENST00000542663 IGHV3-15A0A0B4J1V0 119 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 CCDC151A5D8V7 595 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 ABCD4O14678 606 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 OIP5O43482 229 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 ENPP1P22413 925 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 ATP5F1P24539 256 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 EIF1P41567 113 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 OR3A2P47893 321 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 PRKAG1P54619 331 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 CASP9P55211 416 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 SRSF2Q01130 221 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 STK11Q15831 433 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 CCNJQ5T5M9 372 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 AGAP6Q5VW22 663 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 NOXRED1Q6NXP6 359 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 MISPQ8IVT2 679 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 NUP43Q8NFH3 380 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 FBXO27Q8NI29 283 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 FAM76AQ8TAV0 307 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 HTRA1Q92743 480 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 ZNF524Q96C55 264 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 OTUB1Q96FW1 271 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 PSD2Q9BQI7 771 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 BEX2Q9BXY8 128 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 MID1IP1Q9NPA3 183 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 TIGARQ9NQ88 270 aa15.75■□□□□ 0.11
CLSTN3-214ENST00000542663 ZNF195O14628 629 aa15.74■□□□□ 0.11
CLSTN3-214ENST00000542663 PDPK1O15530 556 aa15.74■□□□□ 0.11
CLSTN3-214ENST00000542663 SNRPAP09012 282 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-214ENST00000542663 GPC1P35052 558 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms