RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SPATA5L1Q9BVQ7 753 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 PINK1Q9BXM7 581 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 GRIP2Q9C0E4 1043 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 TSPAN10Q9H1Z9 355 aaPredicted RBP8.54□□□□□ -1.04
DDX55-208ENST00000541259 METTL7AQ9H8H3 244 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 TRIM45Q9H8W5 580 aaPredicted RBP8.54□□□□□ -1.04
DDX55-208ENST00000541259 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.54□□□□□ -1.04
DDX55-208ENST00000541259 OLAHQ9NV23 265 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 ABI3Q9P2A4 366 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 ZNF232Q9UNY5 417 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 IFT52Q9Y366 437 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 ATMQ13315 3056 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 DNAJC13O75165 2243 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 ZNF407Q9C0G0 2248 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 PKD1L2Q7Z442 2459 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 A0A1W2PQD3 144 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 CDHR4A6H8M9 788 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 PINLYPA6NC86 204 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 OR5H15A6NDH6 313 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 AQP12BA6NM10 295 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 M0R3H8 397 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 NDUFB5O43674 189 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 GMFGO60234 142 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 ADAM11O75078 769 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 ENTPD5O75356 428 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 STAMBPO95630 424 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 LGI1O95970 557 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 CSTAP01040 98 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 SEMG1P04279 462 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 THBS1P07996 1170 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 GKN3PP0CG01 181 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 PRG2P13727 222 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 NID1P14543 1247 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 PRKAR1BP31321 381 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 DNASE1L1P49184 302 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 PSMA6P60900 246 aaKnown RBP8.53□□□□□ -1.04
DDX55-208ENST00000541259 ARG2P78540 354 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 HOXC5Q00444 222 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 MTX3Q5HYI7 312 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 TBCELQ5QJ74 424 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 RNF220Q5VTB9 566 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 OR5M10Q6IEU7 315 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 CBLN3Q6UW01 205 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 TSEN54Q7Z6J9 526 aaKnown RBP8.53□□□□□ -1.04
DDX55-208ENST00000541259 AQP12AQ8IXF9 295 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 GPALPP1Q8IXQ4 340 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 DND1Q8IYX4 353 aaKnown RBP8.53□□□□□ -1.04
DDX55-208ENST00000541259 ADGRG5Q8IZF4 528 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 EID3Q8N140 333 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 ZNF527Q8NB42 609 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 GOLM1Q8NBJ4 401 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 PSD4Q8NDX1 1056 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 MDS2Q8NDY4 140 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 VANGL1Q8TAA9 524 aaPredicted RBP8.53□□□□□ -1.04
DDX55-208ENST00000541259 RNF217Q8TC41 542 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 DUSP19Q8WTR2 217 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 CANT1Q8WVQ1 401 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 SLCO4A1Q96BD0 722 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 SH3YL1Q96HL8 342 aaPredicted RBP8.53□□□□□ -1.04
DDX55-208ENST00000541259 PYURFQ96I23 114 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 SGCZQ96LD1 299 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 DOHHQ9BU89 302 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 ANGPTL4Q9BY76 406 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 TBL1XR1Q9BZK7 514 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 TRIM15Q9C019 465 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 PRORYQ9H606 182 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 KLHL1Q9NR64 748 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 DEPPQ9NTK1 212 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 ADPRHL2Q9NX46 363 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 DNAJB12Q9NXW2 375 aaKnown RBP8.53□□□□□ -1.04
DDX55-208ENST00000541259 KLRF1Q9NZS2 232 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 RPS6KA6Q9UK32 745 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 ABCG2Q9UNQ0 655 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 SAMD4AQ9UPU9 718 aaKnown RBP8.53□□□□□ -1.04
DDX55-208ENST00000541259 CARD8Q9Y2G2 431 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 NTNG1Q9Y2I2 539 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 SH3GLB1Q9Y371 365 aa8.53□□□□□ -1.04
DDX55-208ENST00000541259 DHRS12A0PJE2 317 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 GTPBP1O00178 669 aaKnown RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 TPST2O60704 377 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 SLC25A12O75746 678 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 CYP7B1O75881 506 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 MT-ND1P03886 318 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 P04436 131 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 C8BP07358 591 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 SP1P08047 785 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 ADH7P40394 386 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 CASRP41180 1078 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 CLK3P49761 638 aaKnown RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 TNFSF10P50591 281 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 GPR85P60893 370 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 ELF3P78545 371 aaPredicted RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 RHDQ02161 417 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 ZNF117Q03924 483 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 SKP2Q13309 424 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 NPTX1Q15818 432 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 NRF1Q16656 503 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.52□□□□□ -1.05
DDX55-208ENST00000541259 IFI44LQ53G44 452 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms