RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PGM3O95394 542 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 ZIC2O95409 532 aaPredicted RBP17.06■□□□□ 0.32
VPS33A-205ENST00000541169 C1QCP02747 245 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF17P17021 662 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 PTGER4P35408 488 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 MTPNP58546 118 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 CBFBQ13951 182 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 CD226Q15762 336 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 WLSQ5T9L3 541 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 OR5M10Q6IEU7 315 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 OR5W2Q8NH69 310 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 FAM57AQ8TBR7 257 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 ARSGQ96EG1 525 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 RTN4RQ9BZR6 473 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 IKZF5Q9H5V7 419 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 TAGLN3Q9UI15 199 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 ICAM5Q9UMF0 924 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 L3MBTL1Q9Y468 752 aa17.06■□□□□ 0.32
VPS33A-205ENST00000541169 CELA3AP09093 270 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 GABRA1P14867 456 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 GNLYP22749 145 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 ADH6P28332 368 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 NUDT2P50583 147 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 ZNF117Q03924 483 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 SCARB2Q14108 478 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 VEZF1Q14119 521 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 CAPRIN1Q14444 709 aaKnown RBP17.05■□□□□ 0.32
VPS33A-205ENST00000541169 MAPK11Q15759 364 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 ADRM1Q16186 407 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 BCL2A1Q16548 175 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 EIPR1Q53HC9 387 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 RNF220Q5VTB9 566 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 VASNQ6EMK4 673 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 GRAMD2AQ8IUY3 354 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 FAM71CQ8NEG0 241 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 OR52P1PQ8NH57 321 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 OR10A6Q8NH74 314 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 RASSF5Q8WWW0 418 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 TMEM234Q8WY98 164 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 REXO5Q96IC2 774 aaKnown RBP17.05■□□□□ 0.32
VPS33A-205ENST00000541169 RUBCNLQ9H714 662 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 KCNE5Q9UJ90 142 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 ACAD8Q9UKU7 415 aa17.05■□□□□ 0.32
VPS33A-205ENST00000541169 GPC6Q9Y625 555 aaPredicted RBP17.05■□□□□ 0.32
VPS33A-205ENST00000541169 SMG1Q96Q15 3661 aaKnown RBP17.05■□□□□ 0.32
VPS33A-205ENST00000541169 NPIPA5A0A0B4J1W7 369 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 FIGNL2A6NMB9 653 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 NPIPA7E9PJI5 369 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 ZIC3O60481 467 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 WDR1O75083 606 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 NUDT14O95848 222 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 NUDT7P0C024 238 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 NPIPA8P0DM63 369 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 HK1P19367 917 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 PGCP20142 388 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 PCGF2P35227 344 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 PGM1P36871 562 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 PER3P56645 1201 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 SKP2Q13309 424 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 MRPL49Q13405 166 aaKnown RBP17.04■□□□□ 0.32
VPS33A-205ENST00000541169 MAPK14Q16539 360 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 PATL1Q86TB9 770 aaKnown RBP17.04■□□□□ 0.32
VPS33A-205ENST00000541169 GATSQ8NAP1 163 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 TNIP2Q8NFZ5 429 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 NFKBIDQ8NI38 313 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 PRR7Q8TB68 274 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 ABTB1Q969K4 478 aaPredicted RBP17.04■□□□□ 0.32
VPS33A-205ENST00000541169 MAL2Q969L2 176 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 RELTQ969Z4 430 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 GPATCH1Q9BRR8 931 aaKnown RBP17.04■□□□□ 0.32
VPS33A-205ENST00000541169 TP63Q9H3D4 680 aaPredicted RBP17.04■□□□□ 0.32
VPS33A-205ENST00000541169 CARD8Q9Y2G2 431 aa17.04■□□□□ 0.32
VPS33A-205ENST00000541169 RP1L1Q8IWN7 2480 aaPredicted RBP17.04■□□□□ 0.32
VPS33A-205ENST00000541169 SVILO95425 2214 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 CDHR4A6H8M9 788 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 AHRRA9YTQ3 701 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 FAAHO00519 579 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 IFNA14P01570 189 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 PABPC4LP0CB38 370 aaKnown RBP17.03■□□□□ 0.32
VPS33A-205ENST00000541169 CPN1P15169 458 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 FKBP2P26885 142 aaKnown RBP17.03■□□□□ 0.32
VPS33A-205ENST00000541169 PRKAR1BP31321 381 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 CA7P43166 264 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 GFRA1P56159 465 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 EEFSECP57772 596 aaKnown RBP17.03■□□□□ 0.32
VPS33A-205ENST00000541169 KCNC4Q03721 635 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 VMACQ2NL98 169 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 SPATS1Q496A3 300 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 C4orf17Q53FE4 359 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 RABL3Q5HYI8 236 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 WIPI1Q5MNZ9 446 aaPredicted RBP17.03■□□□□ 0.32
VPS33A-205ENST00000541169 CALHM3Q86XJ0 350 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 GTPBP8Q8N3Z3 284 aaPredicted RBP17.03■□□□□ 0.32
VPS33A-205ENST00000541169 TMCO5AQ8N6Q1 288 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 ST8SIA1Q92185 356 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 ZG16BQ96DA0 208 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 MRGPRX4Q96LA9 322 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 SFXN2Q96NB2 322 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 SLC39A3Q9BRY0 314 aa17.03■□□□□ 0.32
VPS33A-205ENST00000541169 SLC6A15Q9H2J7 730 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms