RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 COQ10BQ9H8M1 238 aa13.5□□□□□ -0.25
PUDP-206ENST00000540122 IPPKQ9H8X2 491 aa13.5□□□□□ -0.25
PUDP-206ENST00000540122 ANKZF1Q9H8Y5 726 aa13.5□□□□□ -0.25
PUDP-206ENST00000540122 Q9N2J8 555 aa13.5□□□□□ -0.25
PUDP-206ENST00000540122 SENP1Q9P0U3 644 aa13.5□□□□□ -0.25
PUDP-206ENST00000540122 MRTO4Q9UKD2 239 aaKnown RBP13.5□□□□□ -0.25
PUDP-206ENST00000540122 WBP11Q9Y2W2 641 aaKnown RBP13.5□□□□□ -0.25
PUDP-206ENST00000540122 GOLGA6L10A0A0M3HER8 536 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 DNALI1O14645 258 aaPredicted RBP13.49□□□□□ -0.25
PUDP-206ENST00000540122 COQ9O75208 318 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 IGHV3-9P01782 118 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 DAOP14920 347 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 ZFP36P26651 326 aaKnown RBP13.49□□□□□ -0.25
PUDP-206ENST00000540122 RAB10P61026 200 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 SLC18A2Q05940 514 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 DLG1Q12959 904 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 ZKSCAN8Q15776 578 aaPredicted RBP13.49□□□□□ -0.25
PUDP-206ENST00000540122 FRG2Q64ET8 278 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 ZNF100Q8IYN0 542 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 GATSQ8NAP1 163 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 TOR1AIP2Q8NFQ8 470 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 ZNF75CPQ92670 426 aaPredicted RBP13.49□□□□□ -0.25
PUDP-206ENST00000540122 FRG2BQ96QU4 278 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 SUCNR1Q9BXA5 334 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 NSMCE4AQ9NXX6 385 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 GRIP1Q9Y3R0 1128 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 PTGDR2Q9Y5Y4 395 aa13.49□□□□□ -0.25
PUDP-206ENST00000540122 CCT8L1PA6NM43 557 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 ALG1L2C9J202 215 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 EFNA2O43921 213 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 IGKV1D-16P01601 117 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 ELK4P28324 431 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 SERPINF1P36955 418 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 PSMD4P55036 377 aaKnown RBP13.48□□□□□ -0.25
PUDP-206ENST00000540122 UBA52P62987 128 aaKnown RBP13.48□□□□□ -0.25
PUDP-206ENST00000540122 RASGEF1BQ0VAM2 473 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 FOXF1Q12946 379 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 GTF2H2Q13888 395 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 OCLNQ16625 522 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 GTF2H2CQ6P1K8 395 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 FAM9CQ8IZT9 166 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 EXOSC8Q96B26 276 aaKnown RBP13.48□□□□□ -0.25
PUDP-206ENST00000540122 SH3YL1Q96HL8 342 aaPredicted RBP13.48□□□□□ -0.25
PUDP-206ENST00000540122 SLC6A7Q99884 636 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 PKP2Q99959 881 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 CDC42EP4Q9H3Q1 356 aaKnown RBP13.48□□□□□ -0.25
PUDP-206ENST00000540122 LPAR2Q9HBW0 351 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 MED29Q9NX70 200 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 MOKQ9UQ07 419 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 PCDHB14Q9Y5E9 798 aa13.48□□□□□ -0.25
PUDP-206ENST00000540122 GJE1A6NN92 205 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 ZNF724A8MTY0 619 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 ESRRBO95718 433 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 LINGO3P0C6S8 592 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 PPOXP50336 477 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 IDH3GP51553 393 aaPredicted RBP13.47□□□□□ -0.25
PUDP-206ENST00000540122 TRA2BP62995 288 aaKnown RBP13.47□□□□□ -0.25
PUDP-206ENST00000540122 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
PUDP-206ENST00000540122 RIN1Q13671 783 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 GABRA6Q16445 453 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 TMEM176BQ3YBM2 270 aaPredicted RBP13.47□□□□□ -0.25
PUDP-206ENST00000540122 FBXW9Q5XUX1 488 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 C1orf229Q6ZS94 237 aaPredicted RBP13.47□□□□□ -0.25
PUDP-206ENST00000540122 SPATA19Q7Z5L4 167 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 GALNT5Q7Z7M9 940 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 SAMD14Q8IZD0 417 aaPredicted RBP13.47□□□□□ -0.25
PUDP-206ENST00000540122 UBE2J2Q8N2K1 259 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 WDR31Q8NA23 367 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 ZFP90Q8TF47 636 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 LRRC39Q96DD0 335 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 MUS81Q96NY9 551 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 GPR22Q99680 433 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 RAB1BQ9H0U4 201 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 UNKLQ9H9P5 680 aaKnown RBP13.47□□□□□ -0.25
PUDP-206ENST00000540122 HHATLQ9HCP6 504 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
PUDP-206ENST00000540122 B9A039 149 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 OR7A17O14581 309 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 CYTIPO60759 359 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 MSMBP08118 114 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 IFNGR1P15260 489 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.25
PUDP-206ENST00000540122 EIF1P41567 113 aaKnown RBP13.46□□□□□ -0.25
PUDP-206ENST00000540122 PPP1R7Q15435 360 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 PFKFB4Q16877 469 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 SGO1Q5FBB7 561 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 TTC19Q6DKK2 380 aaPredicted RBP13.46□□□□□ -0.25
PUDP-206ENST00000540122 ZNF786Q8N393 782 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 GRK7Q8WTQ7 553 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 MS4A14Q96JA4 679 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 LRRC37BQ96QE4 947 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 NMRAL1Q9HBL8 299 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 GIMAP4Q9NUV9 329 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 TAS2R16Q9NYV7 291 aa13.46□□□□□ -0.25
PUDP-206ENST00000540122 LOC105371242A0A075B767 164 aa13.45□□□□□ -0.26
PUDP-206ENST00000540122 A0A087WV62 115 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms